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Publications from Laboratory of AI for Digital Health | Engineering Science Department | University of Oxford

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Publications

Latest Publications

Conference Papers
  1. Liu, Yu, et al. "SurvUnc: A Meta-Model Based Uncertainty Quantification Framework for Survival Analysis." Proceedings of the 31th ACM SIGKDD Conference on Knowledge Discovery and Data Mining. 2025. paper, code
  2. Li, Chenqi, et al. "AnchorInv: Few-Shot Class-Incremental Learning of Physiological Signals via Feature Space-Guided Inversion." Proceedings of the AAAI Conference on Artificial Intelligence. Vol. 39. No. 13. 2025. paper, code
  3. Luo, Zhiyao, et al. "Position: reinforcement learning in dynamic treatment regimes needs critical reexamination." Proceedings of the 41st International Conference on Machine Learning. 2024. paper, code
Journal Papers
  1. Yuan, Kevin, et al. "Transformers and large language models are efficient feature extractors for electronic health record studies." Communications Medicine 5.1 (2025): 83. paper, code
  2. Ghosheh, Ghadeer O., Moritz Gögl, and Tingting Zhu. "A perspective on individualized treatment effects estimation from time-series health data." Journal of the American Medical Informatics Association (2025): ocae323. paper
  3. Yuan, Kevin, et al. "Machine learning and clinician predictions of antibiotic resistance in Enterobacterales bloodstream infections." Journal of Infection 90.2 (2025): 106388. paper
  4. Mesinovic, Munib, Peter Watkinson, and Tingting Zhu. "DySurv: dynamic deep learning model for survival analysis with conditional variational inference." Journal of the American Medical Informatics Association (2024): ocae271. paper
  5. Ghosheh, Ghadeer O., Jin Li, and Tingting Zhu. "A survey of generative adversarial networks for synthesizing structured electronic health records." ACM Computing Surveys 56.6 (2024): 1-34. paper
  6. Li, Chenqi, Timothy Denison, and Tingting Zhu. "A Survey of Few-Shot Learning for Biomedical Time Series." IEEE Reviews in Biomedical Engineering (2024). paper
  7. Ghosheh, Ghadeer O., C. Louise Thwaites, and Tingting Zhu. "Synthesizing electronic health records for predictive models in low-middle-income countries (LMICs)." Biomedicines 11.6 (2023): 1749. paper
Pre-Prints
  1. Mesinovic, Munib, et al. "DynaGraph: Interpretable Multi-Label Prediction from EHRs via Dynamic Graph Learning and Contrastive Augmentation." arXiv preprint arXiv:2503.22257 (2025). paper, code
  2. Liu, Yu, et al. "Identifying profiles, trajectories, burden, social and biological factors in 3.3 million individuals with multimorbidity in England." medRxiv (2025): 2025-05. paper
  3. Mesinovic, Munib, et al. "DynaGraph: Interpretable Multi-Label Prediction from EHRs via Dynamic Graph Learning and Contrastive Augmentation." arXiv preprint arXiv:2503.22257 (2025). paper
  4. Ghosheh, Ghadeer O., Jin Li, and Tingting Zhu. "Understanding Missingness in Time-series Electronic Health Records for Individualized Representation." arXiv preprint arXiv:2402.15730 (2024). paper
  5. Luo, Zhiyao, et al. "DTR-bench: an in silico environment and benchmark platform for reinforcement learning based dynamic treatment regime." arXiv preprint arXiv:2405.18610 (2024). paper
  6. Ghosheh, Ghadeer O., Jin Li, and Tingting Zhu. "Understanding Missingness in Time-series Electronic Health Records for Individualised Representation." arXiv preprint arXiv:2402.15730 (2024). paper
  7. Ghosheh, Ghadeer O., Jin Li, and Tingting Zhu. "IGNITE: Individualized GeNeration of Imputations in Time-series Electronic health records." arXiv preprint arXiv:2401.04402 (2024). paper
  8. Mesinovic, Munib, Peter Watkinson, and Tingting Zhu. "Explainable AI for clinical risk prediction: a survey of concepts, methods, and modalities." arXiv preprint arXiv:2308.08407 (2023). paper
  9. Mesinovic, Munib, Peter Watkinson, and Tingting Zhu. "XMI-ICU: Explainable Machine Learning Model for Pseudo-Dynamic Prediction of Mortality in the ICU for Heart Attack Patients." arXiv preprint arXiv:2305.06109 (2023). paper

All Publications

Multi-teacher self-distillation based on adaptive weighting and activation pattern for enhancing lightweight arrhythmia recognition

Wang Z, Ma C, Zhang S, Zhao M, Liu Y et al. (2025), Information Fusion, 103178-103178

Altmetric score is
BibTeX View PDF 
@article{multiteachersel-2025/4,
  title={Multi-teacher self-distillation based on adaptive weighting and activation pattern for enhancing lightweight arrhythmia recognition},
  author={Wang Z, Ma C, Zhang S, Zhao M, Liu Y et al.},
  journal={Information Fusion},
  pages={103178-103178},
  publisher={Elsevier},
  year = "2025"
}

Transformers and large language models are efficient feature extractors for electronic health record studies

Yuan K, Yoon CH, Gu Q, Munby H, Walker AS et al. (2025), communications medicine, 5(1)

Altmetric score is
BibTeX View PDF 
@article{transformersand-2025/3,
  title={Transformers and large language models are efficient feature extractors for electronic health record studies},
  author={Yuan K, Yoon CH, Gu Q, Munby H, Walker AS et al.},
  journal={communications medicine},
  volume={5},
  number={83},
  publisher={Nature Research},
  year = "2025"
}

Uncertainty-Inspired Multi-Task Learning in Arbitrary Scenarios of ECG Monitoring.

Wang X, Gao H, Ma C, Zhu T, Yang F et al. (2025), IEEE journal of biomedical and health informatics, PP

Altmetric score is
BibTeX View PDF 
@article{uncertaintyinsp-2025/2,
  title={Uncertainty-Inspired Multi-Task Learning in Arbitrary Scenarios of ECG Monitoring.},
  author={Wang X, Gao H, Ma C, Zhu T, Yang F et al.},
  journal={IEEE journal of biomedical and health informatics},
  volume={PP},
  year = "2025"
}

Status of Digital Health Technology Adoption in 5 Vietnamese Hospitals: Cross-Sectional Assessment.

Tran DM, Thanh Dung N, Minh Duc C, Ngoc Hon H, Minh Khoi L et al. (2025), JMIR formative research, 9, e53483

Altmetric score is
BibTeX View PDF 
@article{statusofdigital-2025/2,
  title={Status of Digital Health Technology Adoption in 5 Vietnamese Hospitals: Cross-Sectional Assessment.},
  author={Tran DM, Thanh Dung N, Minh Duc C, Ngoc Hon H, Minh Khoi L et al.},
  journal={JMIR formative research},
  volume={9},
  number={ARTN e53483},
  pages={e53483},
  publisher={JMIR Publications},
  year = "2025"
}

A perspective on individualized treatment effects estimation from time-series health data

Ghosheh GO, Gögl M & Zhu T (2025), A Scholarly Journal of Informatics in Health and Biomedicine

Altmetric score is
BibTeX View PDF 
@article{aperspectiveoni-2025/2,
  title={A perspective on individualized treatment effects estimation from time-series health data},
  author={Ghosheh GO, Gögl M & Zhu T},
  journal={A Scholarly Journal of Informatics in Health and Biomedicine},
  number={ocae323},
  publisher={Oxford University Press},
  year = "2025"
}
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