Publications from the Systems Engineering group, Department of Engineering Science, University of Oxford
Systems Engineering
Selected Publications
Most Recent Publications
Optimal phasing of tidal stream power around the British Isles and within the English Channel for green ammonia production
Driscoll H, Salmon N & Bañares-Alcántara R (2025), Renewable Energy, 241, 122335-122335
BibTeX
@article{optimalphasingo-2025/3,
title={Optimal phasing of tidal stream power around the British Isles and within the English Channel for green ammonia production},
author={Driscoll H, Salmon N & Bañares-Alcántara R},
journal={Renewable Energy},
volume={241},
pages={122335-122335},
publisher={Elsevier},
year = "2025"
}
Towards decarbonizing the supply chain of dairy industry: current practice and emerging strategies
Ni H, Zeng H, Liu Z, Li W, Miao S et al. (2025), Carbon Neutrality, 4(1)
BibTeX
@article{towardsdecarbon-2025/3,
title={Towards decarbonizing the supply chain of dairy industry: current practice and emerging strategies},
author={Ni H, Zeng H, Liu Z, Li W, Miao S et al.},
journal={Carbon Neutrality},
volume={4},
number={8},
publisher={Springer Nature Singapore},
year = "2025"
}
Seq2Topt: a sequence-based deep learning predictor of enzyme optimal temperature.
Qiu S, Hu B, Zhao J, Xu W & Yang A (2025), Briefings in bioinformatics, 26(2), bbaf114
BibTeX
@article{seqtoptasequenc-2025/3,
title={Seq2Topt: a sequence-based deep learning predictor of enzyme optimal temperature.},
author={Qiu S, Hu B, Zhao J, Xu W & Yang A},
journal={Briefings in bioinformatics},
volume={26},
pages={bbaf114},
publisher={Oxford University Press (OUP)},
year = "2025"
}
Assessing the net carbon removal potential by a combination of direct air capture and recycled concrete aggregates carbonation
Chen L & Yang A (2025), Resources, Conservation and Recycling, 212
BibTeX
@article{assessingthenet-2025/1,
title={Assessing the net carbon removal potential by a combination of direct air capture and recycled concrete aggregates carbonation},
author={Chen L & Yang A},
journal={Resources, Conservation and Recycling},
volume={212},
year = "2025"
}
Quorum sensing regulating the productivity and stability of cross-feeding cocultivation
Chen D, Qu Z, Yang S, Li Y, Yu S et al. (2024), Chemical Engineering Journal, 502, 158167
BibTeX
@article{quorumsensingre-2024/12,
title={Quorum sensing regulating the productivity and stability of cross-feeding cocultivation},
author={Chen D, Qu Z, Yang S, Li Y, Yu S et al.},
journal={Chemical Engineering Journal},
volume={502},
pages={158167},
publisher={Elsevier},
year = "2024"
}
Assembly of functional microbial ecosystems: from molecular circuits to communities.
Wu S, Zhou Y, Dai L, Yang A & Qiao J (2024), FEMS microbiology reviews, fuae026
BibTeX
@article{assemblyoffunct-2024/11,
title={Assembly of functional microbial ecosystems: from molecular circuits to communities.},
author={Wu S, Zhou Y, Dai L, Yang A & Qiao J},
journal={FEMS microbiology reviews},
pages={fuae026},
publisher={Oxford University Press (OUP)},
year = "2024"
}
Green ammonia imports could supplement long-duration energy storage in the UK
Palazzi C, Nayak-Luke R, Verschuur J, Salmon N, Hall J et al. (2024), Environmental Research Energy, 1(4), 043001-043001
BibTeX
@article{greenammoniaimp-2024/9,
title={Green ammonia imports could supplement long-duration energy storage in the UK},
author={Palazzi C, Nayak-Luke R, Verschuur J, Salmon N, Hall J et al.},
journal={Environmental Research Energy},
volume={1},
pages={043001-043001},
publisher={IOP Publishing},
year = "2024"
}
Design and analysis of quorum sensing language “Interpreter” ecosystem for microbial community
Wu S, Zhang H, Zhou Y, Xu C, Yuan B et al. (2024), Chemical Engineering Journal, 496, 153148
BibTeX
@article{designandanalys-2024/9,
title={Design and analysis of quorum sensing language “Interpreter” ecosystem for microbial community},
author={Wu S, Zhang H, Zhou Y, Xu C, Yuan B et al.},
journal={Chemical Engineering Journal},
volume={496},
pages={153148},
publisher={Elsevier},
year = "2024"
}
Potential of Reducing CO<sub>2</sub> Emissions in Cement Production through Altering Clinker Compositions
Williams F & Yang A (2024), Industrial & Engineering Chemistry Research
BibTeX
@article{potentialofredu-2024/9,
title={Potential of Reducing CO<sub>2</sub> Emissions in Cement Production through Altering Clinker Compositions},
author={Williams F & Yang A},
journal={Industrial & Engineering Chemistry Research},
publisher={American Chemical Society (ACS)},
year = "2024"
}
Exploiting the temporal characteristics of tidal stream power for green ammonia production
Driscoll H, Salmon N & Bañares-Alcántara R (2024), Renewable Energy, 120377-120377
BibTeX
@article{exploitingthete-2024/3,
title={Exploiting the temporal characteristics of tidal stream power for green ammonia production},
author={Driscoll H, Salmon N & Bañares-Alcántara R},
journal={Renewable Energy},
pages={120377-120377},
publisher={Elsevier},
year = "2024"
}
Optimal fuel supply of green ammonia to decarbonise global shipping
Verschuur J, Salmon N, Hall J & Bañares-Alcántara R (2024), Environmental Research Infrastructure and Sustainability, 4(1), 015001-015001
BibTeX
@article{optimalfuelsupp-2024/3,
title={Optimal fuel supply of green ammonia to decarbonise global shipping},
author={Verschuur J, Salmon N, Hall J & Bañares-Alcántara R},
journal={Environmental Research Infrastructure and Sustainability},
volume={4},
pages={015001-015001},
publisher={IOP Publishing},
year = "2024"
}
2023 roadmap on ammonia as a carbon-free fuel
David WIF, Agnew GD, Bañares-Alcántara R, Barth J, Hansen JB et al. (2024), Journal of Physics Energy, 6(2)
BibTeX
@article{roadmaponammoni-2024/2,
title={2023 roadmap on ammonia as a carbon-free fuel},
author={David WIF, Agnew GD, Bañares-Alcántara R, Barth J, Hansen JB et al.},
journal={Journal of Physics Energy},
volume={6},
number={021501},
publisher={IOP Publishing},
year = "2024"
}
Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism
Qiu S, Huang Y, Liang S, Zeng H & Yang A (2024), Microbial Biotechnology, 17(2)
BibTeX
@article{systematiceluci-2024/2,
title={Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism},
author={Qiu S, Huang Y, Liang S, Zeng H & Yang A},
journal={Microbial Biotechnology},
volume={17},
number={e14425},
publisher={Wiley},
year = "2024"
}
Decarbonisation pathways of the cement production process via hydrogen and oxy-combustion
Williams F, Yang A & Nhuchhen DR (2024), Energy Conversion and Management, 300
BibTeX
@article{decarbonisation-2024/1,
title={Decarbonisation pathways of the cement production process via hydrogen and oxy-combustion},
author={Williams F, Yang A & Nhuchhen DR},
journal={Energy Conversion and Management},
volume={300},
year = "2024"
}
DLTKcat: deep learning-based prediction of temperature-dependent enzyme turnover rates
Qiu S, Zhao S & Yang A (2024), Briefings in Bioinformatics, 25(1)
BibTeX
@article{dltkcatdeeplear-2024/1,
title={DLTKcat: deep learning-based prediction of temperature-dependent enzyme turnover rates},
author={Qiu S, Zhao S & Yang A},
journal={Briefings in Bioinformatics},
volume={25},
number={bbad506},
publisher={Oxford University Press},
year = "2024"
}
Food–energy–water nexus optimization brings substantial reduction of urban resource consumption and greenhouse gas emissions
Zhang P, Zhang L, Hao Y, Xu M, Pang M et al. (2024), PNAS Nexus, 3(2)
BibTeX
@article{foodenergywater-2024/1,
title={Food–energy–water nexus optimization brings substantial reduction of urban resource consumption and greenhouse gas emissions},
author={Zhang P, Zhang L, Hao Y, Xu M, Pang M et al.},
journal={PNAS Nexus},
volume={3},
number={pgae028},
publisher={Oxford University Press},
year = "2024"
}
Mathematical Modelling of a Novel Mineral Carbonation System Based on Biological pH Swing for Atmospheric CO2 Removal
Zhang Y & Yang A (2024), Computer Aided Chemical Engineering, 53(Archives of Microbiology 116 1978), 2509-2514
BibTeX
@article{mathematicalmod-2024/,
title={Mathematical Modelling of a Novel Mineral Carbonation System Based on Biological pH Swing for Atmospheric CO2 Removal},
author={Zhang Y & Yang A},
journal={Computer Aided Chemical Engineering},
volume={53},
pages={2509-2514},
publisher={Elsevier},
year = "2024"
}
Model-Based Assessment of Electrochemical Cells and Systems for Atmospheric CO2 Removal
Liu G & Yang A (2024), 53(Energy Environmental Science 4 4 2011), 541-546
BibTeX
@misc{modelbasedasses-2024/,
title={Model-Based Assessment of Electrochemical Cells and Systems for Atmospheric CO2 Removal},
author={Liu G & Yang A},
year = "2024"
}
Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production
Qiu S, Yang A, Yang X, Li W, Zeng H et al. (2024)
BibTeX
@misc{proteometradeof-2024/,
title={Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production},
author={Qiu S, Yang A, Yang X, Li W, Zeng H et al.},
year = "2024"
}
Re-organising nutrients flows in Leicestershire: systemic innovation to transform nutrient flows for environmental and socioeconomic benefits
Yang A, Ng KS, Thompson I, Tsui T, Wei Z et al. (2023)
BibTeX
@misc{reorganisingnut-2023/12,
title={Re-organising nutrients flows in Leicestershire: systemic innovation to transform nutrient flows for environmental and socioeconomic benefits},
author={Yang A, Ng KS, Thompson I, Tsui T, Wei Z et al.},
year = "2023"
}