Showing 50 publications by Rene Bañares-Alcántara, Aidong Yang
Unraveling risk dynamics in the urban food-energy-water system for sustainable management: A coupled model considering trivariate complexity
Li X, Zhang L, Yang A, Hao Y, Zhang P et al. (2025), Technological Forecasting and Social Change, 221, 124332-124332
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                            @article{unravelingriskd-2025/12,
  title={Unraveling risk dynamics in the urban food-energy-water system for sustainable management: A coupled model considering trivariate complexity},
  author={Li X, Zhang L, Yang A, Hao Y, Zhang P et al.},
  journal={Technological Forecasting and Social Change},
  volume={221},
  pages={124332-124332},
  publisher={Elsevier},
  year = "2025"
}
Proteome constrained metabolic modeling of <i>Sus scrofa</i> muscle stem cells for cultured meat production
Qiu S, Kratochvilova E, Huang WE, Cui Z, Agnew T et al. (2025)
Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production.
Qiu S, Yang A, Yang X, Ni H, Li W et al. (2025), Metabolic engineering, 91, 254-266
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                            @article{proteometradeof-2025/5,
  title={Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production.},
  author={Qiu S, Yang A, Yang X, Ni H, Li W et al.},
  journal={Metabolic engineering},
  volume={91},
  pages={254-266},
  year = "2025"
}
Modeling and Feasibility Assessment of Mineral Carbonation Based on Biological pH Swing for Atmospheric CO 2 Removal
Zhang Y, Long S, Duret MT, Bullock LA, Lam P et al. (2025), ACS Sustainable Chemistry and Engineering, 13(19), 6972-6981
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                            @article{modelingandfeas-2025/5,
  title={Modeling and Feasibility Assessment of Mineral Carbonation Based on Biological pH Swing for Atmospheric CO 2 Removal},
  author={Zhang Y, Long S, Duret MT, Bullock LA, Lam P et al.},
  journal={ACS Sustainable Chemistry and Engineering},
  volume={13},
  pages={6972-6981},
  publisher={American Chemical Society},
  year = "2025"
}
Optimal phasing of tidal stream power around the British Isles and within the English Channel for green ammonia production
Driscoll H, Salmon N & Bañares-Alcántara R (2025), Renewable Energy, 241, 122335-122335
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                            @article{optimalphasingo-2025/3,
  title={Optimal phasing of tidal stream power around the British Isles and within the English Channel for green ammonia production},
  author={Driscoll H, Salmon N & Bañares-Alcántara R},
  journal={Renewable Energy},
  volume={241},
  pages={122335-122335},
  publisher={Elsevier},
  year = "2025"
}
Facilitating India’s deep decarbonisation through sector coupling of electricity with green hydrogen and ammonia
Cesaro Z, Bramstoft R, Bañares-Alcántara R & Ives MC (2025), Energy Storage and Applications, 2(2)
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                            @article{facilitatingind-2025/3,
  title={Facilitating India’s deep decarbonisation through sector coupling of electricity with green hydrogen and ammonia},
  author={Cesaro Z, Bramstoft R, Bañares-Alcántara R & Ives MC},
  journal={Energy Storage and Applications},
  volume={2},
  number={4},
  publisher={MDPI},
  year = "2025"
}
Towards decarbonizing the supply chain of dairy industry: current practice and emerging strategies
Ni H, Zeng H, Liu Z, Li W, Miao S et al. (2025), Carbon Neutrality, 4(1)
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                            @article{towardsdecarbon-2025/3,
  title={Towards decarbonizing the supply chain of dairy industry: current practice and emerging strategies},
  author={Ni H, Zeng H, Liu Z, Li W, Miao S et al.},
  journal={Carbon Neutrality},
  volume={4},
  number={8},
  publisher={Springer Nature Singapore},
  year = "2025"
}
Seq2Topt: a sequence-based deep learning predictor of enzyme optimal temperature.
Qiu S, Hu B, Zhao J, Xu W & Yang A (2025), Briefings in bioinformatics, 26(2), bbaf114
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                            @article{seqtoptasequenc-2025/3,
  title={Seq2Topt: a sequence-based deep learning predictor of enzyme optimal temperature.},
  author={Qiu S, Hu B, Zhao J, Xu W & Yang A},
  journal={Briefings in bioinformatics},
  volume={26},
  pages={bbaf114},
  publisher={Oxford University Press (OUP)},
  year = "2025"
}
Quorum sensing regulating the productivity and stability of cross-feeding cocultivation
Chen D, Qu Z, Yang S, Li Y, Yu S et al. (2024), Chemical Engineering Journal, 502, 158167
Assembly of functional microbial ecosystems: from molecular circuits to communities.
Wu S, Zhou Y, Dai L, Yang A & Qiao J (2024), FEMS microbiology reviews, fuae026
Assessing the net carbon removal potential by a combination of direct air capture and recycled concrete aggregates carbonation
Chen L & Yang A (2024), Resources, Conservation and Recycling, 212
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                            @article{assessingthenet-2024/10,
  title={Assessing the net carbon removal potential by a combination of direct air capture and recycled concrete aggregates carbonation},
  author={Chen L & Yang A},
  journal={Resources, Conservation and Recycling},
  volume={212},
  number={107940},
  publisher={Elsevier},
  year = "2024"
}
Green ammonia imports could supplement long-duration energy storage in the UK
Palazzi C, Nayak-Luke R, Verschuur J, Salmon N, Hall J et al. (2024), Environmental Research Energy, 1(4), 043001-043001
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                            @article{greenammoniaimp-2024/9,
  title={Green ammonia imports could supplement long-duration energy storage in the UK},
  author={Palazzi C, Nayak-Luke R, Verschuur J, Salmon N, Hall J et al.},
  journal={Environmental Research Energy},
  volume={1},
  pages={043001-043001},
  publisher={IOP Publishing},
  year = "2024"
}
Design and analysis of quorum sensing language “Interpreter” ecosystem for microbial community
Wu S, Zhang H, Zhou Y, Xu C, Yuan B et al. (2024), Chemical Engineering Journal, 496, 153148
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                            @article{designandanalys-2024/9,
  title={Design and analysis of quorum sensing language “Interpreter” ecosystem for microbial community},
  author={Wu S, Zhang H, Zhou Y, Xu C, Yuan B et al.},
  journal={Chemical Engineering Journal},
  volume={496},
  pages={153148},
  publisher={Elsevier},
  year = "2024"
}
Potential of reducing CO2 emissions in cement production through altering clinker compositions
Williams F & Yang A (2024), Industrial & Engineering Chemistry Research, 63(40), 17158-17167
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                            @article{potentialofredu-2024/9,
  title={Potential of reducing CO2 emissions in cement production through altering clinker compositions},
  author={Williams F & Yang A},
  journal={Industrial & Engineering Chemistry Research},
  volume={63},
  pages={17158-17167},
  publisher={American Chemical Society},
  year = "2024"
}
Exploiting the temporal characteristics of tidal stream power for green ammonia production
Driscoll H, Salmon N & Bañares-Alcántara R (2024), Renewable Energy, 120377-120377
Optimal fuel supply of green ammonia to decarbonise global shipping
Verschuur J, Salmon N, Hall J & Bañares-Alcántara R (2024), Environmental Research Infrastructure and Sustainability, 4(1), 015001-015001
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                            @article{optimalfuelsupp-2024/3,
  title={Optimal fuel supply of green ammonia to decarbonise global shipping},
  author={Verschuur J, Salmon N, Hall J & Bañares-Alcántara R},
  journal={Environmental Research Infrastructure and Sustainability},
  volume={4},
  pages={015001-015001},
  publisher={IOP Publishing},
  year = "2024"
}
2023 roadmap on ammonia as a carbon-free fuel
David WIF, Agnew GD, Bañares-Alcántara R, Barth J, Hansen JB et al. (2024), Journal of Physics Energy, 6(2)
Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism
Qiu S, Huang Y, Liang S, Zeng H & Yang A (2024), Microbial Biotechnology, 17(2)
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                            @article{systematiceluci-2024/2,
  title={Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism},
  author={Qiu S, Huang Y, Liang S, Zeng H & Yang A},
  journal={Microbial Biotechnology},
  volume={17},
  number={e14425},
  publisher={Wiley},
  year = "2024"
}
The Role of Tidal Stream Energy in Green Ammonia and Green Hydrogen Production in The English Channel
Driscoll H, Palazzi C & Bañares-Alcántara R (2024), 00, 1-4
Decarbonisation pathways of the cement production process via hydrogen and oxy-combustion
Williams F, Yang A & Nhuchhen DR (2024), Energy Conversion and Management, 300
DLTKcat: deep learning-based prediction of temperature-dependent enzyme turnover rates
Qiu S, Zhao S & Yang A (2024), Briefings in Bioinformatics, 25(1)
Food–energy–water nexus optimization brings substantial reduction of urban resource consumption and greenhouse gas emissions
Zhang P, Zhang L, Hao Y, Xu M, Pang M et al. (2024), PNAS Nexus, 3(2)
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                            @article{foodenergywater-2024/1,
  title={Food–energy–water nexus optimization brings substantial reduction of urban resource consumption and greenhouse gas emissions},
  author={Zhang P, Zhang L, Hao Y, Xu M, Pang M et al.},
  journal={PNAS Nexus},
  volume={3},
  number={pgae028},
  publisher={Oxford University Press},
  year = "2024"
}
Mathematical Modelling of a Novel Mineral Carbonation System Based on Biological pH Swing for Atmospheric CO2 Removal
Zhang Y & Yang A (2024), Computer Aided Chemical Engineering, 53(Archives of Microbiology 116 1978), 2509-2514
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                            @article{mathematicalmod-2024/,
  title={Mathematical Modelling of a Novel Mineral Carbonation System Based on Biological pH Swing for Atmospheric CO2 Removal},
  author={Zhang Y & Yang A},
  journal={Computer Aided Chemical Engineering},
  volume={53},
  pages={2509-2514},
  publisher={Elsevier},
  year = "2024"
}
Model-Based Assessment of Electrochemical Cells and Systems for Atmospheric CO2 Removal
Liu G & Yang A (2024), 53(Energy Environmental Science 4 4 2011), 541-546
Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production
Qiu S, Yang A, Yang X, Li W, Zeng H et al. (2024)
Re-organising nutrients flows in Leicestershire: systemic innovation to transform nutrient flows for environmental and socioeconomic benefits
Yang A, Ng KS, Thompson I, Tsui T, Wei Z et al. (2023)
Assessing the impact of climate change on the cost of production of green ammonia from offshore wind
Hatton L, Bañares-Alcántara R, Sparrow S, Lott F & Salmon N (2023), International Journal of Hydrogen Energy, 49(D), 635-643
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                            @article{assessingtheimp-2023/11,
  title={Assessing the impact of climate change on the cost of production of green ammonia from offshore wind},
  author={Hatton L, Bañares-Alcántara R, Sparrow S, Lott F & Salmon N},
  journal={International Journal of Hydrogen Energy},
  volume={49},
  pages={635-643},
  publisher={Elsevier},
  year = "2023"
}
Decarbonisation pathways of the cement production process via hydrogen and oxy-combustion
Williams F, Yang A & Nhuchhen DR (2023), Energy Conversion and Management, 300
Technoeconomic evaluation of offshore green ammonia production using tidal and wind energy: a case study
Driscoll H, Salmon N & Bañares-Alcántara R (2023), Energy Sources Part A Recovery Utilization and Environmental Effects, 45(3), 7222-7244
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                            @article{technoeconomice-2023/8,
  title={Technoeconomic evaluation of offshore green ammonia production using tidal and wind energy: a case study},
  author={Driscoll H, Salmon N & Bañares-Alcántara R},
  journal={Energy Sources Part A Recovery Utilization and Environmental Effects},
  volume={45},
  pages={7222-7244},
  publisher={Taylor & Francis},
  year = "2023"
}
Flux balance analysis-based metabolic modeling of microbial secondary metabolism: current status and outlook
Qiu S, Yang A & Zeng H (2023), PLoS Computational Biology, 19(8)
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                            @article{fluxbalanceanal-2023/8,
  title={Flux balance analysis-based metabolic modeling of microbial secondary metabolism: current status and outlook},
  author={Qiu S, Yang A & Zeng H},
  journal={PLoS Computational Biology},
  volume={19},
  number={e1011391},
  publisher={Public Library of Science},
  year = "2023"
}
Dynamic metagenome-scale metabolic modeling of a yogurt bacterial community.
Qiu S, Zeng H, Yang Z, Hung W-L, Wang B et al. (2023), Biotechnology and bioengineering, 120(8), 2186-2198
Flux balance analysis-based metabolic modeling of microbial secondary metabolism: Current status and outlook.
Qiu S, Yang A & Zeng H (2023), PLoS computational biology, 19(8), e1011391
Impact of process flexibility and imperfect forecasting on the operation and design of Haber–Bosch green ammonia
Salmon N & Bañares-Alcántara R (2023), RSC Sustainability, 1(4), 923-937
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                            @article{impactofprocess-2023/7,
  title={Impact of process flexibility and imperfect forecasting on the operation and design of Haber–Bosch green ammonia},
  author={Salmon N & Bañares-Alcántara R},
  journal={RSC Sustainability},
  volume={1},
  pages={923-937},
  publisher={Royal Society of Chemistry (RSC)},
  year = "2023"
}
Offshore green ammonia synthesis
Salmon N & Bañares-Alcántara R (2023), Nature Synthesis, 2(7), 604-611
Dynamic metagenome-scale metabolic modeling of a yogurt bacterial community
Qiu S, Zeng H, Yang Z, Hung W-L, Wang B et al. (2023), Biotechnology and Bioengineering, 120(8), 2186-2198
Global green hydrogen-based steel opportunities surrounding high quality renewable energy and iron ore deposits
Devlin A, Kossen J, Goldie-Jones H & Yang A (2023), Nature Communications, 14
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                            @article{globalgreenhydr-2023/5,
  title={Global green hydrogen-based steel opportunities surrounding high quality renewable energy and iron ore deposits},
  author={Devlin A, Kossen J, Goldie-Jones H & Yang A},
  journal={Nature Communications},
  volume={14},
  number={2578},
  publisher={Springer Nature},
  year = "2023"
}
Global green hydrogen-based steel opportunities surrounding high quality renewable energy and iron ore deposits.
Devlin A, Kossen J, Goldie-Jones H & Yang A (2023), Nature communications, 14(1), 2578
Surrogate modelling-assisted comparison of reactor schemes for carbon dioxide removal by enhanced weathering of minerals using seawater
Zhang J, Yang A, Darton R, Xing L & Vaughan A (2023), Chemical Engineering Journal, 461
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                            @article{surrogatemodell-2023/2,
  title={Surrogate modelling-assisted comparison of reactor schemes for carbon dioxide removal by enhanced weathering of minerals using seawater},
  author={Zhang J, Yang A, Darton R, Xing L & Vaughan A},
  journal={Chemical Engineering Journal},
  volume={461},
  number={141804},
  publisher={Elsevier },
  year = "2023"
}
Quorum sensing-based interactions among drugs, microbes, and diseases.
Wu S, Yang S, Wang M, Song N, Feng J et al. (2023), Science China. Life sciences, 66(1), 137-151
Development of a system model to predict flows and performance of regional waste management planning: A case study of England.
Ng KS & Yang A (2023), Journal of environmental management, 325(Pt B), 116585
Dynamic microbial-community metabolic modeling for yogurt fermentation based on the metagenome of starter culture
Qiu S, Yang Z, Zeng H, Wang B & Yang A (2023), 52, 2619-2624
Model-based Optimisation of Regional Nutrient Flow and Recovery for Resource and Environmental Sustainability
Bhasker Nair PNS, Yang NHN, Zhang W, Ng KS & Yang A (2023), 52, 1387-1392
Incorporation of non-linear efficiency constraints in green ammonia production design for cost minimisation
Salmon N & Bañares-Alcántara R (2023), 52(Energy Environmental Science. 12 7 2019), 2759-2764
Dynamic microbial-community metabolic modeling for yogurt fermentation based on the metagenome of starter culture
Qiu S, Yang Z, Zeng H, Wang B & Yang A (2023), 52(Biotechnology and Bioengineering 118 1 2021), 2619-2624
Model-based Optimisation of Regional Nutrient Flow and Recovery for Resource and Environmental Sustainability
Nair PNSB, Yang N-HN, Zhang W, Ng KS & Yang A (2023), 52(Science of The Total Environment 612 2018), 1387-1392
Dynamic community-level metabolic modeling for fermentation kinetics and metabolic interactions of the yogurt starter culture based on metagenomic analysis
Qiu S, Zeng H, Yang Z, Hung W-L, Wang B et al. (2023)
Systematic elucidation of independently modulated genes in<i>Lactobacillus plantarum</i>reveals a trade-off between secondary and primary metabolism
Qiu S, Huang Y, Liang S, Zeng H & Yang A (2023)
A Multi-Criteria and Multi-Agent Framework for supporting complex decision-making processes
Leoneti AB, Bañares-Alcántara R, Pires EC & de Oliveira SVWB (2022), Group Decision and Negotiation, 31(5), 1025-1050
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                            @article{amulticriteriaa-2022/10,
  title={A Multi-Criteria and Multi-Agent Framework for supporting complex decision-making processes},
  author={Leoneti AB, Bañares-Alcántara R, Pires EC & de Oliveira SVWB},
  journal={Group Decision and Negotiation},
  volume={31},
  pages={1025-1050},
  publisher={Springer Nature},
  year = "2022"
}
Potential of orthogonal and cross-talk quorum sensing for dynamic regulation in cocultivation
Wu S, Qiao J, Yang A & Liu C (2022), Chemical Engineering Journal, 445, 136720