Publications

BibTeX

@article{rhodopsinbasedl-2024/7,
  title={Rhodopsin‐based light‐harvesting system for sustainable synthetic biology},
  author={Tu W, Saeed H & Huang WE},
  journal={Microbial Biotechnology},
  volume={17},
  number={e14521},
  publisher={Wiley Open Access},
  year = "2024"
}

BibTeX

@article{engineeringbion-2024/7,
  title={Engineering bionanoreactor in bacteria for efficient hydrogen production.},
  author={Tu W, Thompson IP & Huang WE},
  journal={Proceedings of the National Academy of Sciences of the United States of America},
  volume={121},
  pages={e2404958121},
  year = "2024"
}

BibTeX

@article{microbioramanan-2024/5,
  title={MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data.},
  author={Lee KS, Landry Z, Athar A, Alcolombri U, Pramoj Na Ayutthaya P et al.},
  journal={Nature microbiology},
  volume={9},
  pages={1152-1156},
  year = "2024"
}

BibTeX

@article{semirationaldes-2024/5,
  title={Semi-rational design of nitroarene dioxygenase for catalytic ability toward 2,4-dichloronitrobenzene},
  author={Xu J, Li T, Huang WE & Zhou N-Y},
  journal={Applied and Environmental Microbiology},
  publisher={American Society for Microbiology},
  year = "2024"
}

BibTeX

@article{aconceptforinte-2024/5,
  title={A concept for international societally relevant microbiology education and microbiology knowledge promulgation in society.},
  author={Timmis K, Hallsworth JE, McGenity TJ, Armstrong R, Colom MF et al.},
  journal={Microbial biotechnology},
  volume={17},
  pages={e14456},
  year = "2024"
}

BibTeX

@article{optimisationoft-2024/4,
  title={Optimisation of treatment efficiency and effluent toxicity during carbamazepine degradation via electrochemical oxidation},
  author={Feijoo S, Kamali M, Huang WE, Thompson IP & Dewil R},
  journal={Journal of Environmental Chemical Engineering},
  volume={12},
  number={112693},
  publisher={Elsevier},
  year = "2024"
}

BibTeX

@article{redseaweedasana-2024/4,
  title={Red seaweed as an abundant, natural methanogenesis inhibitor for industrial biorefinery},
  author={Tenci N, Ammam F, Austen N, Huang W & Thompson I},
  journal={Journal of Cleaner Production},
  volume={454},
  number={142166},
  publisher={Elsevier},
  year = "2024"
}

BibTeX

@article{snitrosocysteam-2024/4,
  title={S-nitrosocysteamine-functionalised porous graphene oxide nanosheets as nitric oxide delivery vehicles for cardiovascular applications},
  author={Tabish T, Hussain MZ, Zervou S, Myers W, Tu W et al.},
  journal={Redox Biology},
  volume={72},
  number={103144},
  publisher={Elsevier},
  year = "2024"
}

BibTeX

@article{ametabolicmapan-2024/3,
  title={A metabolic map and artificial intelligence-aided identification of nasopharyngeal carcinoma via a single-cell Raman platform},
  author={Xu J, Chen D, Wu W, Ji X, Dou X et al.},
  journal={British Journal of Cancer},
  publisher={Springer Nature},
  year = "2024"
}

BibTeX

@article{rapiddetectiono-2024/2,
  title={Rapid detection of six Oceanobacillus species in Daqu starter using single-cell Raman spectroscopy combined with machine learning},
  author={Xu L, Liang Y, Huang WE, Shang L-D, Chai L-J et al.},
  journal={Microbial Biotechnology},
  volume={17},
  number={e14416},
  publisher={Wiley},
  year = "2024"
}

BibTeX

@article{engineeringarti-2023/12,
  title={Engineering artificial photosynthesis based on rhodopsin for CO<sub>2</sub> fixation.},
  author={Tu W, Xu J, Thompson IP & Huang WE},
  journal={Nature communications},
  volume={14},
  pages={8012},
  year = "2023"
}

BibTeX

@article{engineeringarti-2023/12,
  title={Engineering artificial photosynthesis based on rhodopsin for CO2 fixation},
  author={Tu W, Xu J, Thompson IP & Huang WE},
  journal={Nature Communications},
  volume={14},
  number={8012},
  publisher={Springer Nature},
  year = "2023"
}

BibTeX

@article{constructionofm-2023/11,
  title={Construction of microbial platform chassis for CO2 utilisation},
  author={Della Valle S, Tu W & Huang W},
  journal={Current Opinion in Systems Biology},
  volume={37},
  number={100489},
  publisher={Elsevier},
  year = "2023"
}

BibTeX

@article{applicationofma-2023/10,
  title={Application of magnetic-nanoparticle functionalized whole-cell biosensor array for bioavailability and ecotoxicity estimation at urban contaminated sites.},
  author={Teng T, Huang WE, Li G, Wang X, Song Y et al.},
  journal={The Science of the total environment},
  volume={896},
  pages={165292},
  year = "2023"
}

BibTeX

@article{deepinsightinto-2023/9,
  title={Deep insight into oriented propionate production from food waste: Microbiological interpretation and design practice.},
  author={Wu M, Liu X, Tu W, Xia J, Zou Y et al.},
  journal={Water research},
  volume={243},
  pages={120399},
  year = "2023"
}

BibTeX

@article{developingabloo-2023/8,
  title={Developing a blood cell-based diagnostic test for myalgic encephalomyelitis/chronic fatigue syndrome using peripheral blood mononuclear cells},
  author={Xu J, Lodge T, Kingdon C, Strong JWL, Maclennan J et al.},
  journal={Advanced Science},
  volume={10},
  number={e2302146},
  publisher={Wiley},
  year = "2023"
}

BibTeX

@article{distributedseco-2023/8,
  title={Distributed secondary control based on dynamic diffusion algorithm for current sharing and average voltage regulation in DC microgrids},
  author={Liao D, Gao F, Rogers DJ, Huang W, Liu D et al.},
  journal={Journal of Modern Power Systems and Clean Energy},
  volume={12},
  pages={597-607},
  publisher={IEEE},
  year = "2023"
}

BibTeX

@article{theeffectofnutr-2023/5,
  title={The effect of nutrient limitation on bacterial wax ester production},
  author={Martin L, Huang W & Thompson I},
  journal={Bioresource Technology Reports},
  volume={22},
  number={101423},
  publisher={Elsevier},
  year = "2023"
}

BibTeX

@article{artificialintel-2023/3,
  title={Artificial intelligence-aided rapid and accurate identification of clinical fungal infections by single-cell Raman spectroscopy},
  author={Xu J, Luo Y, Wang J, Tu W & Huang W},
  journal={Frontiers in Microbiology},
  volume={14},
  number={1125676},
  publisher={Frontiers Media},
  year = "2023"
}

BibTeX

@article{growthcoupleden-2023/3,
  title={Growth-coupled enzyme engineering through manipulation of redox cofactor regeneration.},
  author={Nielsen JR, Weusthuis RA & Huang WE},
  journal={Biotechnology advances},
  volume={63},
  pages={108102},
  year = "2023"
}

BibTeX

@article{theramandeuteri-2023/3,
  title={The Raman Deuterium Isotope Probing method as a new assay for evaluating the cytotoxicity level of the GSK2334470 to the MCF‐7 cells},
  author={Huang X, Li C, Li L, Lu Z, Zhang L et al.},
  journal={Journal of Raman Spectroscopy},
  volume={54},
  pages={269-277},
  publisher={Wiley},
  year = "2023"
}

BibTeX

@article{metabolicreprog-2023/1,
  title={Metabolic reprogramming in colon cancer cells persistently infected with Newcastle disease virus},
  author={Yu T, Jadhav AC, Xu J, Harris AL, Nair V et al.},
  journal={Cancers},
  volume={15},
  number={811},
  publisher={MDPI },
  year = "2023"
}

BibTeX

@article{leveragingsingl-2023/1,
  title={Leveraging single-cell Raman spectroscopy and single-cell sorting for the detection and identification of yeast infections.},
  author={Wang J, Meng S, Lin K, Yi X, Sun Y et al.},
  journal={Analytica chimica acta},
  volume={1239},
  pages={340658},
  year = "2023"
}

BibTeX

@article{growthcoupleden-2023/1,
  title={Growth-coupled enzyme engineering through manipulation of redox cofactor regeneration},
  author={Nielsen JR, Weusthuis RA & Huang WE},
  journal={Biotechnology Advances},
  volume={63},
  number={108102},
  publisher={Elsevier},
  year = "2023"
}

BibTeX

@article{anaerobiccodige-2023/1,
  title={Anaerobic co-digestion of Euphorbia tirucalli with pig blood for volatile fatty acid production},
  author={Tenci N, Ammam F, Huang W & Thompson I},
  journal={Bioresource Technology Reports},
  volume={21},
  number={101333},
  publisher={Elsevier},
  year = "2023"
}

BibTeX

@article{engineeringarho-2022/10,
  title={Engineering a rhodopsin-based photo-electrosynthetic system in bacteria for CO2 fixation},
  author={Tu W, Xu J, Della Valle S, Thompson I & Huang W},
  journal={ACS Synthetic Biology},
  volume={11},
  pages={3805-3816},
  publisher={American Chemical Society},
  year = "2022"
}

BibTeX

@article{rhodopsindriven-2022/10,
  title={Rhodopsin driven microbial CO2 fixation using synthetic biology design},
  author={Tu W & Huang WE},
  journal={Environmental Microbiology},
  volume={25},
  pages={126-130},
  publisher={Wiley},
  year = "2022"
}

BibTeX

@article{revealingcofixi-2022/10,
  title={Revealing CO2-fixing SAR11 bacteria in the ocean by Raman-based single-cell metabolic profiling and genomics},
  author={Jing X, Gong Y, Xu T, Davison PA, MacGregor-Chatwin C et al.},
  journal={BioDesign Research},
  volume={2022},
  number={9782712},
  publisher={American Association for the Advancement of Science},
  year = "2022"
}

BibTeX

@article{aquantitativert-2022/7,
  title={A quantitative RT-qLAMP for the detection of SARS-CoV-2 and human gene in clinical application},
  author={Yu Y, Zhou J, Ji M, Li B, Wang Y et al.},
  journal={Microbial Biotechnology},
  volume={15},
  pages={2619-2630},
  publisher={Wiley},
  year = "2022"
}

BibTeX

@article{diagnosisofmyal-2022/4,
  title={Diagnosis of myalgic encephalomyelitis/chronic fatigue syndrome with partial least squares discriminant analysis: Relevance of blood extracellular vesicles},
  author={González-Cebrián A, Almenar-Pérez E, Xu J, Yu T, Huang WE et al.},
  journal={Frontiers in Medicine},
  volume={9},
  number={842991},
  publisher={Frontiers Media},
  year = "2022"
}

BibTeX

@article{useofstaticover-2022/4,
  title={Use of static overpressure to assess the role of acoustic cavitation in ultrasound-mediated gene transfection},
  author={Ng CK, Raymond JL, Driscoll C, Oldroyd S, Huang WE et al.},
  journal={The Journal of the Acoustical Society of America},
  volume={151},
  pages={a173-a173},
  publisher={Acoustical Society of America (ASA)},
  year = "2022"
}

BibTeX

@article{reprogrammingsy-2022/3,
  title={Reprogramming Synthetic Cells for Targeted Cancer Therapy},
  author={Lim B, Yin Y, Ye H, Cui Z, Papachristodoulou A et al.},
  journal={ACS Synthetic Biology},
  volume={11},
  pages={1349-1360},
  publisher={American Chemical Society (ACS)},
  year = "2022"
}

BibTeX

@article{clinicalperspec-2022/3,
  title={Clinical perspective of antimicrobial resistance in bacteria},
  author={Zhu Y, Huang WE & Yang Q},
  journal={Infection and drug resistance},
  volume={15},
  pages={735-746},
  publisher={Dovepress},
  year = "2022"
}

BibTeX

@article{isolationandcul-2022/2,
  title={Isolation and Culture of Single Microbial Cells by Laser Ejection Sorting Technology.},
  author={Liang P, Liu B, Wang Y, Liu K, Zhao Y et al.},
  journal={Applied and environmental microbiology},
  volume={88},
  number={ARTN e01165-21},
  pages={e0116521-e0116521},
  year = "2022"
}

BibTeX

@article{highspeeddiagno-2022/1,
  title={High-speed diagnosis of bacterial pathogens at single cell level by Raman microspectroscopy with machine learning filters and denoising autoencoders},
  author={Xu J & Huang W},
  journal={ACS Chemical Biology},
  volume={17},
  pages={376-385},
  publisher={American Chemical Society},
  year = "2022"
}

BibTeX

@article{revealingcosubs-2022/1,
  title={Revealing CO<sub>2</sub>-Fixing SAR11 Bacteria in the Ocean by Raman-Based Single-Cell Metabolic Profiling and Genomics.},
  author={Jing X, Gong Y, Xu T, Davison PA, MacGregor-Chatwin C et al.},
  journal={Biodesign research},
  volume={2022},
  pages={9782712},
  year = "2022"
}

BibTeX

@misc{applicationofba-2022/,
  title={Application of Bacterial Whole-Cell Biosensors in Health},
  author={Song Y, Rampley CPN, Chen X, Du F, Thompson IP et al.},
  year = "2022"
}

BibTeX

@article{rationaldesigna-2021/9,
  title={Rational design and characterization of nitric oxide biosensors in E. coli Nissle 1917 and mini SimCells
},
  author={Chen XJ, Wang B, Thompson IP & Huang WE},
  journal={ACS Synthetic Biology},
  volume={10},
  pages={2566-2578},
  publisher={American Chemical Society},
  year = "2021"
}

BibTeX

@article{understandingan-2021/9,
  title={Understanding and mathematical modelling of cellular resource allocation in microorganisms: a comparative synthesis},
  author={Zeng H, Rohani R, Huang WE & Yang A},
  journal={BMC Bioinformatics},
  volume={22},
  number={467},
  publisher={BioMed Central},
  year = "2021"
}

BibTeX

@article{clinicalvalidat-2021/8,
  title={Clinical validation of optimised RT-LAMP for the diagnosis of SARS-CoV-2 infection},
  author={Lim BC, Ratcliff J, Nawrot D, Yu Y, Sanghani H et al.},
  journal={Scientific Reports},
  volume={11},
  number={16193},
  publisher={Springer Nature},
  year = "2021"
}

BibTeX

@article{invitroanticanc-2021/8,
  title={In vitro anticancer drug sensitivity sensing through single-cell raman spectroscopy},
  author={Wang J, Lin K, Hu H, Qie X, Huang WE et al.},
  journal={Biosensors},
  volume={11},
  number={286},
  publisher={MDPI},
  year = "2021"
}

BibTeX

@article{ramanspectrosco-2021/8,
  title={Raman spectroscopy and machine learning for the classification of breast cancers},
  author={Zhang L, Li C, Peng D, Yi X, He S et al.},
  journal={Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy},
  volume={264},
  number={120300},
  publisher={Elsevier},
  year = "2021"
}

BibTeX

@article{regulationandch-2021/6,
  title={Regulation and characterization of mutants of fixABCX in Rhizobium leguminosarum},
  author={Webb I, Xu J, Sánchez-Cañizares MC, Ramachandran V, Rutten P et al.},
  journal={Molecular Plant-Microbe Interactions},
  volume={34},
  pages={1167-1180},
  publisher={American Phytopathological Society},
  year = "2021"
}

BibTeX

@article{geneticengineer-2021/5,
  title={Genetic engineering biofilms in situ using ultrasound-mediated DNA delivery},
  author={Ng C, Putra S, Kennerley J, Habgood R, Roy R et al.},
  journal={Microbial Biotechnology},
  volume={14},
  pages={1580-1593},
  publisher={Wiley Open Access},
  year = "2021"
}

BibTeX

@article{unveilingcancer-2021/4,
  title={Unveiling cancer metabolism through spontaneous and coherent Raman spectroscopy and stable isotope probing},
  author={Xu J, Yu T, Zois C, Cheng J, Tang Y et al.},
  journal={Cancers},
  volume={13},
  number={1718},
  publisher={MDPI},
  year = "2021"
}

BibTeX

@article{redesignofultra-2021/3,
  title={Redesign of ultrasensitive and robust RecA gene circuit to sense DNA damage},
  author={Chen JZ, Lim B, Steel H, Song Y, Ji M et al.},
  journal={Microbial Biotechnology},
  volume={14},
  pages={2481-2496},
  publisher={Wiley},
  year = "2021"
}

BibTeX

@article{developmentofaf-2021/3,
  title={Development of a Fast Raman-Assisted Antibiotic Susceptibility Test (FRAST) for the Antibiotic Resistance Analysis of Clinical Urine and Blood Samples.},
  author={Yi X, Song Y, Xu X, Peng D, Wang J et al.},
  journal={Analytical chemistry},
  volume={93},
  pages={5098-5106},
  year = "2021"
}

BibTeX

@article{microbiologybio-2021/2,
  title={Microbiology biotechnology in China},
  author={Huang WE, Yang C, Wang H, Bai L & Zhou N-Y},
  journal={Microbial Biotechnology},
  volume={14},
  pages={322-322},
  publisher={Wiley},
  year = "2021"
}

BibTeX

@article{frommacrotomicr-2021/1,
  title={From Macro to Micro: a combined bioluminescence‐fluorescence approach to monitor bacterial localization},
  author={Soldan R, Sanguankiattichai N, Bach‐Pages M, Bervoets I, Huang WE et al.},
  journal={Environmental Microbiology},
  volume={23},
  pages={2070-2085},
  publisher={Wiley},
  year = "2021"
}

BibTeX

@article{environmentalmi-2020/12,
  title={Environmental microbiology in China},
  author={Huang WE, Liu S-J, Wu X-L, Zhang Y-Z & Wang F},
  journal={Environmental Microbiology},
  volume={23},
  pages={529-529},
  publisher={Wiley},
  year = "2020"
}