Showing 50 publications by Antoine Jérusalem
Full-field, frequency-domain comparison of simulated and measured human brain deformation
Arani A, Okamoto R, Escarcega J, Jerusalem A, Alshareef A et al. (2024), Biomechanics and Modeling in Mechanobiology
BibTeX
@article{fullfieldfreque-2024/12,
title={Full-field, frequency-domain comparison of simulated and measured human brain deformation},
author={Arani A, Okamoto R, Escarcega J, Jerusalem A, Alshareef A et al.},
journal={Biomechanics and Modeling in Mechanobiology},
publisher={Springer},
year = "2024"
}
Soft-finite-element-method-driven multiphysics airfoil optimization
Nguyen V, Naharro P-S, Pena J-M & Jerusalem A (2024), AIAA Journal, 63(1), 148-161
BibTeX
@article{softfiniteeleme-2024/11,
title={Soft-finite-element-method-driven multiphysics airfoil optimization},
author={Nguyen V, Naharro P-S, Pena J-M & Jerusalem A},
journal={AIAA Journal},
volume={63},
pages={148-161},
publisher={American Institute of Aeronautics and Astronautics},
year = "2024"
}
Soft-Finite-Element-Method-Driven Multiphysics Airfoil Optimization
Nguyen V-D, Naharro P-S, Pe??a J-M & J??rusalem A (2024), AIAA Journal, 1-14
BibTeX
@article{softfiniteeleme-2024/11,
title={Soft-Finite-Element-Method-Driven Multiphysics Airfoil Optimization},
author={Nguyen V-D, Naharro P-S, Pe??a J-M & J??rusalem A},
journal={AIAA Journal},
pages={1-14},
publisher={American Institute of Aeronautics and Astronautics (AIAA)},
year = "2024"
}
Model calibration using a parallel differential evolution algorithm in computational neuroscience: simulation of stretch induced nerve deficit
LaTorre A, Kwong MT, Garc??a-Grajales JA, Shi R, J??rusalem A et al. (2024)
BibTeX
@misc{modelcalibratio-2024/9,
title={Model calibration using a parallel differential evolution algorithm in computational neuroscience: simulation of stretch induced nerve deficit},
author={LaTorre A, Kwong MT, Garc??a-Grajales JA, Shi R, J??rusalem A et al.},
year = "2024"
}
Full-field, frequency-domain comparison of simulated and measured human brain deformation.
Arani AH, Okamoto RJ, Escarcega JD, Jerusalem A, Alshareef AA et al. (2024)
Effects of fetal position on the loading of the fetal brain during the onset of the second stage of labour
Collier AM, Louwagie E, Khalid GA, Jones MD, Jerusalem A et al. (2024), Journal of Biomechanical Engineering, 146(11)
BibTeX
@article{effectsoffetalp-2024/6,
title={Effects of fetal position on the loading of the fetal brain during the onset of the second stage of labour},
author={Collier AM, Louwagie E, Khalid GA, Jones MD, Jerusalem A et al.},
journal={Journal of Biomechanical Engineering},
volume={146},
number={111001},
publisher={American Society of Mechanical Engineers},
year = "2024"
}
Extension of APFEM to geometrical alterations and application to stochastic homogenisation
Ammouche Y & Jerusalem A (2024), International Journal for Numerical Methods in Engineering
Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons
Adam C, Kayal C, Ercole A, Antoranz Contera S, Ye H et al. (2023), Communications Physics, 6(1)
BibTeX
@article{actionofthegene-2023/7,
title={Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons},
author={Adam C, Kayal C, Ercole A, Antoranz Contera S, Ye H et al.},
journal={Communications Physics},
volume={6},
number={174},
publisher={Springer Nature},
year = "2023"
}
The a posteriori finite element method (APFEM), a framework for efficient parametric study and Bayesian inferences
ammouche Y & J??rusalem A (2023), Computer Methods in Applied Mechanics and Engineering, 412
BibTeX
@article{theaposteriorif-2023/5,
title={The a posteriori finite element method (APFEM), a framework for efficient parametric study and Bayesian inferences},
author={ammouche Y & J??rusalem A},
journal={Computer Methods in Applied Mechanics and Engineering},
volume={412},
number={115996},
publisher={Elsevier},
year = "2023"
}
A numerical framework coupling finite element and meshless methods in sequential and parallel simulations
Nguyen VD, Kirchhelle C, Abdollahi A, Garcia Grajales J, Li D et al. (2023), Finite Elements in Analysis and Design, 219
BibTeX
@article{anumericalframe-2023/2,
title={A numerical framework coupling finite element and meshless methods in sequential and parallel simulations},
author={Nguyen VD, Kirchhelle C, Abdollahi A, Garcia Grajales J, Li D et al.},
journal={Finite Elements in Analysis and Design},
volume={219},
number={103927},
publisher={Elsevier},
year = "2023"
}
The under-representation of women in biomechanical sports-related concussion studies
Haste P, Bueno L, Jerusalem A & Bergmann J (2023), Proceedings of the 2023 International Research Council on the Biomechanics of Injury, 301-302
BibTeX
@inproceedings{theunderreprese-2023/1,
title={The under-representation of women in biomechanical sports-related concussion studies},
author={Haste P, Bueno L, Jerusalem A & Bergmann J},
booktitle={2023 International Research Council on the Biomechanics of Injury (IRCOBI23)},
pages={301-302},
year = "2023"
}
Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons
Adam C, Kayal C, Ercole A, Contera S, Ye H et al. (2023), COMMUNICATIONS PHYSICS, 6(1)
BibTeX
@article{actionofthegene-2023/,
title={Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons},
author={Adam C, Kayal C, Ercole A, Contera S, Ye H et al.},
journal={COMMUNICATIONS PHYSICS},
volume={6},
number={ARTN 174},
year = "2023"
}
Modelling transcranial ultrasound neuromodulation: an energy-based multiscale framework
Chen H, Felix C, Folloni D, Verhagen L, Sallet J et al. (2022), Acta Biomaterialia, 151, 317-332
BibTeX
@article{modellingtransc-2022/7,
title={Modelling transcranial ultrasound neuromodulation: an energy-based multiscale framework},
author={Chen H, Felix C, Folloni D, Verhagen L, Sallet J et al.},
journal={Acta Biomaterialia},
volume={151},
pages={317-332},
publisher={Elsevier},
year = "2022"
}
A modular nonlinear stochastic finite element formulation for uncertainty estimation
Ammouche Y & Jerusalem A (2022), Computer Methods in Applied Mechanics and Engineering, 396
BibTeX
@article{amodularnonline-2022/5,
title={A modular nonlinear stochastic finite element formulation for uncertainty estimation},
author={Ammouche Y & Jerusalem A},
journal={Computer Methods in Applied Mechanics and Engineering},
volume={396},
number={115044},
publisher={Elsevier},
year = "2022"
}
A modular nonlinear stochastic finite element formulation for uncertainty estimation
Ammouche Y & Jerusalem A (2022), Computer Methods in Applied Mechanics and Engineering, 396
BibTeX
@article{amodularnonline-2022/5,
title={A modular nonlinear stochastic finite element formulation for uncertainty estimation},
author={Ammouche Y & Jerusalem A},
journal={Computer Methods in Applied Mechanics and Engineering},
volume={396},
number={115044},
publisher={Elsevier},
year = "2022"
}
Voltage-driven alterations to neuron viscoelasticity
Kayal C, Tamayo-Elizalde M, Adam C, Ye H & Jerusalem A (2022), Bioelectricity, 4(1), 31-38
White matter tract transcranial ultrasound stimulation, a computational study
felix C, Folloni D, Chen H, Sallet J & Jerusalem A (2021), Computers in Biology and Medicine, 140
BibTeX
@article{whitemattertrac-2021/12,
title={White matter tract transcranial ultrasound stimulation, a computational study},
author={felix C, Folloni D, Chen H, Sallet J & Jerusalem A},
journal={Computers in Biology and Medicine},
volume={140},
number={105094},
publisher={Elsevier},
year = "2021"
}
Single cell electrophysiological alterations under dynamic loading at ultrasonic frequencies
Tamayo-Elizalde M, Kayal C, Ye H & Jerusalem A (2021), Brain Multiphysics, 2
Single cell electrophysiological alterations under dynamic loading at ultrasonic frequencies
Tamayo-Elizalde M, Kayal C, Ye H & Jerusalem A (2021), Brain Multiphysics, 2
A framework for low intensity low frequency ultrasound neuromodulation sonication parameters identification from micromechanical flexoelectricity modelling
Chen H & Jerusalem A (2021), Ultrasound in Medicine and Biology, 47(7), 1985-1991
BibTeX
@article{aframeworkforlo-2021/4,
title={A framework for low intensity low frequency ultrasound neuromodulation sonication parameters identification from micromechanical flexoelectricity modelling},
author={Chen H & Jerusalem A},
journal={Ultrasound in Medicine and Biology},
volume={47},
pages={1985-1991},
publisher={Elsevier},
year = "2021"
}
Machine learning based multiscale calibration of mesoscopic constitutive models for composite materials: application to brain white matter
Field D, Ammouche Y, Pena J & Jerusalem A (2021), Computational Mechanics, 67(2021), 1629-1643
BibTeX
@article{machinelearning-2021/4,
title={Machine learning based multiscale calibration of mesoscopic constitutive models for composite materials: application to brain white matter},
author={Field D, Ammouche Y, Pena J & Jerusalem A},
journal={Computational Mechanics},
volume={67},
pages={1629-1643},
publisher={Springer Nature},
year = "2021"
}
A machine learning enhanced mechanistic simulation framework for functional deficit prediction in TBI
Schroder A, Lawrence T, Voets N, Garcia-Gonzalez D, Jones M et al. (2021), Frontiers in Bioengineering and Biotechnology, 9
BibTeX
@article{amachinelearnin-2021/3,
title={A machine learning enhanced mechanistic simulation framework for functional deficit prediction in TBI},
author={Schroder A, Lawrence T, Voets N, Garcia-Gonzalez D, Jones M et al.},
journal={Frontiers in Bioengineering and Biotechnology},
volume={9},
number={587082},
publisher={Frontiers Media},
year = "2021"
}
Action potential alterations induced by single F11 neuronal cell loading
Tamayo-Elizalde M, Chen H, Malboubi M, Ye H & Jerusalem A (2021), Progress in Biophysics and Molecular Biology, 162, 141-153
BibTeX
@article{actionpotential-2021/1,
title={Action potential alterations induced by single F11 neuronal cell loading},
author={Tamayo-Elizalde M, Chen H, Malboubi M, Ye H & Jerusalem A},
journal={Progress in Biophysics and Molecular Biology},
volume={162},
pages={141-153},
publisher={Elsevier},
year = "2021"
}
Design of FDM 3D printed polymers: an experimental-modelling methodology for mechanical property prediction
Garzon-Hernandez S, Garcia-Gonzalez D, Jerusalem A & Arias A (2019), Materials and Design, 188(March 2020)
BibTeX
@article{designoffdmdpri-2019/12,
title={Design of FDM 3D printed polymers: an experimental-modelling methodology for mechanical property prediction},
author={Garzon-Hernandez S, Garcia-Gonzalez D, Jerusalem A & Arias A},
journal={Materials and Design},
volume={188},
number={108414},
publisher={Elsevier},
year = "2019"
}
Model calibration using a parallel differential evolution algorithm in computational neuroscience: Simulation of stretch induced nerve deficit
Latorre A, Kwong MT, Garcia-Grajales JA, Shi R, Jerusalem A et al. (2019), Journal of Computational Science, 39
BibTeX
@article{modelcalibratio-2019/11,
title={Model calibration using a parallel differential evolution algorithm in computational neuroscience: Simulation of stretch induced nerve deficit},
author={Latorre A, Kwong MT, Garcia-Grajales JA, Shi R, Jerusalem A et al.},
journal={Journal of Computational Science},
volume={39},
number={101053},
publisher={Elsevier},
year = "2019"
}
Medical imaging based in silico head model for ischaemic stroke simulation
Bing Y, Garcia-Gonzalez D, Voets N & J??rusalem A (2019), Journal of the Mechanical Behavior of Biomedical Materials, 101
BibTeX
@article{medicalimagingb-2019/9,
title={Medical imaging based in silico head model for ischaemic stroke simulation},
author={Bing Y, Garcia-Gonzalez D, Voets N & J??rusalem A},
journal={Journal of the Mechanical Behavior of Biomedical Materials},
volume={101},
number={103442},
publisher={Elsevier},
year = "2019"
}
Datasets for multi-scale diffraction analysis (synchrotron XRD and EBSD) of twinning-detwinning during tensile-compressive deformation of AZ31B magnesium alloy samples
Zhang H, J??rusalem A, Salvati E, Papadaki C, Fong KS et al. (2019), Data in Brief, 26, 104423
BibTeX
@article{datasetsformult-2019/8,
title={Datasets for multi-scale diffraction analysis (synchrotron XRD and EBSD) of twinning-detwinning during tensile-compressive deformation of AZ31B magnesium alloy samples},
author={Zhang H, J??rusalem A, Salvati E, Papadaki C, Fong KS et al.},
journal={Data in Brief},
volume={26},
pages={104423},
publisher={Elsevier},
year = "2019"
}
Electrophysiological-mechanical coupling in the neuronal membrane and its role in ultrasound neuromodulation and general anaesthesia
Jerusalem A, Al-Rekabi Z, Chen H, Ercole A, Malboubi M et al. (2019), Acta Biomaterialia, 97, 116-140
BibTeX
@article{electrophysiolo-2019/7,
title={Electrophysiological-mechanical coupling in the neuronal membrane and its role in ultrasound neuromodulation and general anaesthesia},
author={Jerusalem A, Al-Rekabi Z, Chen H, Ercole A, Malboubi M et al.},
journal={Acta Biomaterialia},
volume={97},
pages={116-140},
publisher={Elsevier},
year = "2019"
}
Two mechanisms regulate directional cell growth in Arabidopsis lateral roots
Kirchhelle C, Garcia-Gonzalez D, Irani NG, J??rusalem A & Moore I (2019), eLife, 8
BibTeX
@article{twomechanismsre-2019/7,
title={Two mechanisms regulate directional cell growth in Arabidopsis lateral roots},
author={Kirchhelle C, Garcia-Gonzalez D, Irani NG, J??rusalem A & Moore I},
journal={eLife},
volume={8},
number={e47988},
publisher={eLife Sciences Publications},
year = "2019"
}
Energy based mechano-electrophysiological model of CNS damage at the tissue scale
Garcia-Gonzalez D & Jerusalem A (2019), Journal of the Mechanics and Physics of Solids, 125, 22-37
Ionic current enhancement through localised membrane geometrical deformation
Jerusalem A & Kwong A (2019), Extreme Mechanics Letters, 29, 100469
Computational model of the mechanoelectrophysiological coupling in axons with application to neuromodulation
Chen H, Garcia-Gonzalez D & Jerusalem A (2019), Physical Review E, 99, 032406
BibTeX
@article{computationalmo-2019/3,
title={Computational model of the mechanoelectrophysiological coupling in axons with application to neuromodulation},
author={Chen H, Garcia-Gonzalez D & Jerusalem A},
journal={Physical Review E},
volume={99},
pages={032406},
publisher={American Physical Society},
year = "2019"
}
Engineering a uniaxial substrate-stretching device for simultaneous electrophysiological measurements and imaging of strained peripheral neurons
Bianchi F, George JH, Malboubi M, Jerusalem A & Ye H (2019), Medical Engineering & Physics, 67, 1-10
BibTeX
@article{engineeringauni-2019/3,
title={Engineering a uniaxial substrate-stretching device for simultaneous electrophysiological measurements and imaging of strained peripheral neurons},
author={Bianchi F, George JH, Malboubi M, Jerusalem A & Ye H},
journal={Medical Engineering & Physics},
volume={67},
pages={1-10},
publisher={Elsevier},
year = "2019"
}
Ion current and action potential alterations in peripheral neurons subject to uniaxial strain
Bianchi F, Malboubi M, George JH, Jerusalem A, Thompson M et al. (2019), Journal of Neuroscience Research, 97(7), 744-751
BibTeX
@article{ioncurrentandac-2019/3,
title={Ion current and action potential alterations in peripheral neurons subject to uniaxial strain},
author={Bianchi F, Malboubi M, George JH, Jerusalem A, Thompson M et al.},
journal={Journal of Neuroscience Research},
volume={97},
pages={744-751},
publisher={Wiley},
year = "2019"
}
SoftFEM: the soft finite element method
Pe??a JM, Latorre A & Jerusalem A (2019), International Journal for Numerical Methods in Engineering, 118(10), 606-630
Multi-scale mechanisms of twinning-detwinning in magnesium alloy AZ31B simulated by crystal plasticity modeling and validated via in situ synchrotron XRD and in situ SEM-EBSD
Zhang H, Jerusalem A, Salvati E, Papadaki C, Fong KS et al. (2019), International Journal of Plasticity, 119, 43-56
BibTeX
@article{multiscalemecha-2019/2,
title={Multi-scale mechanisms of twinning-detwinning in magnesium alloy AZ31B simulated by crystal plasticity modeling and validated via in situ synchrotron XRD and in situ SEM-EBSD},
author={Zhang H, Jerusalem A, Salvati E, Papadaki C, Fong KS et al.},
journal={International Journal of Plasticity},
volume={119},
pages={43-56},
publisher={Elsevier},
year = "2019"
}
Molecular dynamics simulation of cell membrane pore sealing
Zhang L, Zhang Z, Negahban M & Jerusalem A (2019), Extreme Mechanics Letters, 27, 83-93
Input files for simulations in: Lili Zhang, Zesheng Zhang, Mehrdad Negahban, Antoine J??rusalem, Molecular dynamics simulation of cell membrane pore sealing, Extreme Mechanics Letters, 2019, https://doi.org/10.1016/j.eml.2019.01.008.
Zhang L (2019)
BibTeX
@misc{inputfilesforsi-2019/1,
title={Input files for simulations in: Lili Zhang, Zesheng Zhang, Mehrdad Negahban, Antoine J??rusalem, Molecular dynamics simulation of cell membrane pore sealing, Extreme Mechanics Letters, 2019, https://doi.org/10.1016/j.eml.2019.01.008.},
author={Zhang L},
year = "2019"
}
3D finite element formulation for mechanical-electrophysiological coupling in axonopathy
Kwong MT, Bianchi F, Malboubi M, Garcia Grajales JA, Homsi L et al. (2018), Computer Methods in Applied Mechanics and Engineering, 346, 1025-1050
BibTeX
@article{dfiniteelementf-2018/9,
title={3D finite element formulation for mechanical-electrophysiological coupling in axonopathy},
author={Kwong MT, Bianchi F, Malboubi M, Garcia Grajales JA, Homsi L et al.},
journal={Computer Methods in Applied Mechanics and Engineering},
volume={346},
pages={1025-1050},
publisher={Elsevier},
year = "2018"
}
Rapid and efficient differentiation of functional motor neurons from human iPSC for neural injury modelling
Bianchi F, Malboubi M, Li Y, George J, Jerusalem A et al. (2018), Stem Cell Research, 32, 126-134
BibTeX
@article{rapidandefficie-2018/9,
title={Rapid and efficient differentiation of functional motor neurons from human iPSC for neural injury modelling},
author={Bianchi F, Malboubi M, Li Y, George J, Jerusalem A et al.},
journal={Stem Cell Research},
volume={32},
pages={126-134},
publisher={Elsevier},
year = "2018"
}
Cognition based bTBI mechanistic criteria; a tool for preventive and therapeutic innovations
Garcia-Gonzalez D, Race NS, Voets N, Jenkins DR, Sotiropoulos S et al. (2018), Scientific Reports, 8, 10273
BibTeX
@article{cognitionbasedb-2018/7,
title={Cognition based bTBI mechanistic criteria; a tool for preventive and therapeutic innovations},
author={Garcia-Gonzalez D, Race NS, Voets N, Jenkins DR, Sotiropoulos S et al.},
journal={Scientific Reports},
volume={8},
pages={10273},
publisher={Nature Publishing Group},
year = "2018"
}
Mechanistic models versus machine learning, a fight worth fighting for the biological community?
Baker R, Pena JM, Jayamohan J & Jerusalem A (2018), Biology Letters, 14(5)
BibTeX
@article{mechanisticmode-2018/5,
title={Mechanistic models versus machine learning, a fight worth fighting for the biological community?},
author={Baker R, Pena JM, Jayamohan J & Jerusalem A},
journal={Biology Letters},
volume={14},
number={20170660},
publisher={Royal Society},
year = "2018"
}
3D multicellular model of shock wave-cell interaction
Li D, Hallack A, Cleveland RO & Jerusalem A (2018), Acta Biomaterialia, 77, 282-291
Response of single cells to shock waves and numerically optimized waveforms for cancer therapy
Li D, Pellegrino A, Hallack A, Petrinic N, J??rusalem A et al. (2018), Biophysical Journal, 114(6), 1433-1439
BibTeX
@article{responseofsingl-2018/3,
title={Response of single cells to shock waves and numerically optimized waveforms for cancer therapy},
author={Li D, Pellegrino A, Hallack A, Petrinic N, J??rusalem A et al.},
journal={Biophysical Journal},
volume={114},
pages={1433-1439},
publisher={Elsevier},
year = "2018"
}
A thermodynamically consistent constitutive model for diffusion-assisted plasticity in Ni-based superalloys
Barba Cancho D, Alabort Martinez E, Garcia Gonzalez D, Moverare J, Reed RC et al. (2018), International Journal of Plasticity, 105, 74-98
BibTeX
@article{athermodynamica-2018/1,
title={A thermodynamically consistent constitutive model for diffusion-assisted plasticity in Ni-based superalloys},
author={Barba Cancho D, Alabort Martinez E, Garcia Gonzalez D, Moverare J, Reed RC et al.},
journal={International Journal of Plasticity},
volume={105},
pages={74-98},
publisher={Elsevier},
year = "2018"
}
3D multicellular model of shock wave-cell interaction
Jerusalem A, Li D & Cleveland R (2018)
BibTeX
@misc{dmulticellularm-2018/1,
title={3D multicellular model of shock wave-cell interaction},
author={Jerusalem A, Li D & Cleveland R},
year = "2018"
}
A continuum mechanics constitutive framework for transverse isotropic soft tissues
Garcia-Gonzalez D, Jerusalem A, Garzon-Hernandez S, Zaera R & Arias A (2017), Journal of the Mechanics and Physics of Solids, 112, 209-224
BibTeX
@article{acontinuummecha-2017/12,
title={A continuum mechanics constitutive framework for transverse isotropic soft tissues},
author={Garcia-Gonzalez D, Jerusalem A, Garzon-Hernandez S, Zaera R & Arias A},
journal={Journal of the Mechanics and Physics of Solids},
volume={112},
pages={209-224},
publisher={Elsevier},
year = "2017"
}
Molecular dynamics simulations of heterogeneous cell membranes in response to uniaxial membrane stretches at high loading rates
Zhang L, Zhang Z, Jasa J, Li D, Cleveland R et al. (2017), Scientific Reports, 7, 8316
BibTeX
@article{moleculardynami-2017/8,
title={Molecular dynamics simulations of heterogeneous cell membranes in response to uniaxial membrane stretches at high loading rates},
author={Zhang L, Zhang Z, Jasa J, Li D, Cleveland R et al.},
journal={Scientific Reports},
volume={7},
pages={8316},
publisher={Nature Publishing Group},
year = "2017"
}
On the microtwinning mechanism in a single crystal superalloy
Barba D, Alabort E, Pedrazzini S, Collins D, Wilkinson A et al. (2017), Acta Materialia, 135, 314-329