Showing 50 publications by Konstantinos Kamnitsas
IterMask2: Iterative Unsupervised Anomaly Segmentation via Spatial and Frequency Masking for Brain Lesions in MRI
Liang Z, Guo X, Noble JA & Kamnitsas K (2024)
BibTeX
@misc{itermaskiterati-2024/6,
title={IterMask2: Iterative Unsupervised Anomaly Segmentation via Spatial and Frequency Masking for Brain Lesions in MRI},
author={Liang Z, Guo X, Noble JA & Kamnitsas K},
year = "2024"
}
Feasibility of Federated Learning from Client Databases with Different Brain Diseases and MRI Modalities
Wagner F, Xu W, Saha P, Liang Z, Whitehouse D et al. (2024)
BibTeX
@misc{feasibilityoffe-2024/6,
title={Feasibility of Federated Learning from Client Databases with Different Brain Diseases and MRI Modalities},
author={Wagner F, Xu W, Saha P, Liang Z, Whitehouse D et al.},
year = "2024"
}
Feasibility and benefits of joint learning from MRI databases with different brain diseases and modalities for segmentation
Xu W, Moffat M, Seale T, Liang Z, Wagner F et al. (2024)
As Firm As Their Foundations: Can open-sourced foundation models be used to create adversarial examples for downstream tasks?
Hu A, Gu J, Pinto F, Kamnitsas K & Torr P (2024)
Examining Modality Incongruity in Multimodal Federated Learning for Medical Vision and Language-based Disease Detection
Saha P, Mishra D, Wagner F, Kamnitsas K & Noble JA (2024)
Preface DART 2023
Koch L, Cardoso MJ, Ferrante E, Islam M, Jiang M et al. (2024), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 14293 LNCS, v-vi
BibTeX
@article{prefacedart-2024/1,
title={Preface DART 2023},
author={Koch L, Cardoso MJ, Ferrante E, Islam M, Jiang M et al.},
journal={Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)},
volume={14293 LNCS},
pages={v-vi},
year = "2024"
}
Post-Deployment Adaptation with Access to Source Data via Federated Learning and Source-Target Remote Gradient Alignment
Wagner F, Li Z, Saha P & Kamnitsas K (2024), 14349, 253-263
Joint Optimization of Class-Specific Training- and Test-Time Data Augmentation in Segmentation.
Li Z, Kamnitsas K, Dou Q, Qin C & Glocker B (2023), IEEE transactions on medical imaging, 42(11), 3323-3335
On the use of Mahalanobis distance for out-of-distribution detection with neural networks for medical imaging
Anthony H & Kamnitsas K (2023)
Post-Deployment Adaptation with Access to Source Data via Federated Learning and Source-Target Remote Gradient Alignment
Wagner F, Li Z, Saha P & Kamnitsas K (2023)
Modality Cycles with Masked Conditional Diffusion for Unsupervised Anomaly Segmentation in MRI
Liang Z, Anthony H, Wagner F & Kamnitsas K (2023)
A Review of the Metrics Used to Assess Auto-Contouring Systems in Radiotherapy.
Mackay K, Bernstein D, Glocker B, Kamnitsas K & Taylor A (2023), Clinical oncology (Royal College of Radiologists (Great Britain)), 35(6), 354-369
BibTeX
@article{areviewofthemet-2023/6,
title={A Review of the Metrics Used to Assess Auto-Contouring Systems in Radiotherapy.},
author={Mackay K, Bernstein D, Glocker B, Kamnitsas K & Taylor A},
journal={Clinical oncology (Royal College of Radiologists (Great Britain))},
volume={35},
pages={354-369},
year = "2023"
}
Context Label Learning: Improving Background Class Representations in Semantic Segmentation.
Li Z, Kamnitsas K, Ouyang C, Chen C & Glocker B (2023), IEEE transactions on medical imaging, 42(6), 1885-1896
Joint Optimization of Class-Specific Training- and Test-Time Data Augmentation in Segmentation
Li Z, Kamnitsas K, Dou Q, Qin C & Glocker B (2023)
Author Correction: Federated learning enables big data for rare cancer boundary detection.
Pati S, Baid U, Edwards B, Sheller M, Wang S-H et al. (2023), Nature communications, 14(1), 436
BibTeX
@article{authorcorrectio-2023/1,
title={Author Correction: Federated learning enables big data for rare cancer boundary detection.},
author={Pati S, Baid U, Edwards B, Sheller M, Wang S-H et al.},
journal={Nature communications},
volume={14},
pages={436},
publisher={Springer Nature},
year = "2023"
}
Modality Cycles with Masked Conditional Diffusion for Unsupervised Anomaly Segmentation in MRI
Liang Z, Anthony H, Wagner F & Kamnitsas K (2023), 14394, 168-181
On the Use of Mahalanobis Distance for Out-of-distribution Detection with Neural Networks for Medical Imaging
Anthony H & Kamnitsas K (2023), 14291, 136-146
Context Label Learning: Improving Background Class Representations in Semantic Segmentation
Li Z, Kamnitsas K, Ouyang C, Chen C & Glocker B (2022)
Federated learning enables big data for rare cancer boundary detection.
Pati S, Baid U, Edwards B, Sheller M, Wang S-H et al. (2022), Nature communications, 13(1), 7346-7346
Estimating Model Performance under Domain Shifts with Class-Specific Confidence Scores
Li Z, Kamnitsas K, Islam M, Chen C & Glocker B (2022)
Distributional Gaussian Processes Layers for Out-of-Distribution Detection
Popescu SG, Sharp DJ, Cole JH, Kamnitsas K & Glocker B (2022)
Reporting guideline for the early stage clinical evaluation of decision support systems driven by artificial intelligence: DECIDE-AI
Vasey B, Nagendran M, Campbell B, Clifton DA, Collins GS et al. (2022), BMJ, 377
BibTeX
@article{reportingguidel-2022/5,
title={Reporting guideline for the early stage clinical evaluation of decision support systems driven by artificial intelligence: DECIDE-AI},
author={Vasey B, Nagendran M, Campbell B, Clifton DA, Collins GS et al.},
journal={BMJ},
volume={377},
number={e070904},
publisher={BMJ Publishing Group},
year = "2022"
}
Reporting guideline for the early-stage clinical evaluation of decision support systems driven by artificial intelligence: DECIDE-AI.
Vasey B, Nagendran M, Campbell B, Clifton DA, Collins GS et al. (2022), Nature medicine, 28(5), 924-933
BibTeX
@article{reportingguidel-2022/5,
title={Reporting guideline for the early-stage clinical evaluation of decision support systems driven by artificial intelligence: DECIDE-AI.},
author={Vasey B, Nagendran M, Campbell B, Clifton DA, Collins GS et al.},
journal={Nature medicine},
volume={28},
pages={924-933},
year = "2022"
}
Federated Learning Enables Big Data for Rare Cancer Boundary Detection
Pati S, Baid U, Edwards B, Sheller M, Wang S-H et al. (2022)
Preface
Cardoso MJ, Dou Q, Islam M, Kamnitsas K, Koch L et al. (2022), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 13542 LNCS, v-vi
BibTeX
@article{preface-2022/1,
title={Preface},
author={Cardoso MJ, Dou Q, Islam M, Kamnitsas K, Koch L et al.},
journal={Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)},
volume={13542 LNCS},
pages={v-vi},
year = "2022"
}
Estimating Model Performance Under Domain Shifts with Class-Specific Confidence Scores
Li Z, Kamnitsas K, Islam M, Chen C & Glocker B (2022), 13437, 693-703
Relationship of admission blood proteomic biomarkers levels to lesion type and lesion burden in traumatic brain injury: a CENTER-TBI study
Whitehouse DP, Monteiro M, Czeiter E, Vyvere TV, Valerio F et al. (2021), EBioMedicine, 75
BibTeX
@article{relationshipofa-2021/12,
title={Relationship of admission blood proteomic biomarkers levels to lesion type and lesion burden in traumatic brain injury: a CENTER-TBI study},
author={Whitehouse DP, Monteiro M, Czeiter E, Vyvere TV, Valerio F et al.},
journal={EBioMedicine},
volume={75},
number={103777},
publisher={Elsevier},
year = "2021"
}
Biomarkers for Traumatic Brain Injury: Data Standards and Statistical Considerations.
Huie JR, Mondello S, Lindsell CJ, Antiga L, Yuh EL et al. (2021), Journal of neurotrauma, 38(18), 2514-2529
Transductive image segmentation: Self-training and effect of uncertainty estimation
Kamnitsas K, Winzeck S, Kornaropoulos EN, Whitehouse D, Englman C et al. (2021)
Learning from Partially Overlapping Labels: Image Segmentation under Annotation Shift
Filbrandt G, Kamnitsas K, Bernstein D, Taylor A & Glocker B (2021)
Confidence-based Out-of-Distribution Detection: A Comparative Study and Analysis
Berger C, Paschali M, Glocker B & Kamnitsas K (2021)
Distributional Gaussian Process Layers for Outlier Detection in Image Segmentation
Popescu SG, Sharp DJ, Cole JH, Kamnitsas K & Glocker B (2021)
Analyzing Overfitting Under Class Imbalance in Neural Networks for Image Segmentation.
Li Z, Kamnitsas K & Glocker B (2021), IEEE transactions on medical imaging, 40(3), 1065-1077
Analyzing Overfitting under Class Imbalance in Neural Networks for Image Segmentation
Li Z, Kamnitsas K & Glocker B (2021)
Preface dart 2021
Albarqouni S, Cardoso MJ, Dou Q, Kamnitsas K, Rieke N et al. (2021), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 12968 LNCS, v-vi
BibTeX
@article{prefacedart-2021/1,
title={Preface dart 2021},
author={Albarqouni S, Cardoso MJ, Dou Q, Kamnitsas K, Rieke N et al.},
journal={Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)},
volume={12968 LNCS},
pages={v-vi},
year = "2021"
}
Confidence-Based Out-of-Distribution Detection: A Comparative Study and Analysis
Berger C, Paschali M, Glocker B & Kamnitsas K (2021), 12959, 122-132
Transductive Image Segmentation: Self-training and Effect of Uncertainty Estimation
Kamnitsas K, Winzeck S, Kornaropoulos EN, Whitehouse D, Englman C et al. (2021), 12968, 79-89
Learning from Partially Overlapping Labels: Image Segmentation Under Annotation Shift
Filbrandt G, Kamnitsas K, Bernstein D, Taylor A & Glocker B (2021), 12968, 123-132
Distributional Gaussian Process Layers for Outlier Detection in Image Segmentation
Popescu SG, Sharp DJ, Cole JH, Kamnitsas K & Glocker B (2021), 12729, 415-427
Deep neural network to locate and segment brain tumors outperformed the expert technicians who created the training data.
Mitchell JR, Kamnitsas K, Singleton KW, Whitmire SA, Clark-Swanson KR et al. (2020), Journal of medical imaging (Bellingham, Wash.), 7(5), 055501
BibTeX
@article{deepneuralnetwo-2020/9,
title={Deep neural network to locate and segment brain tumors outperformed the expert technicians who created the training data.},
author={Mitchell JR, Kamnitsas K, Singleton KW, Whitmire SA, Clark-Swanson KR et al.},
journal={Journal of medical imaging (Bellingham, Wash.)},
volume={7},
pages={055501},
year = "2020"
}
Relationship between Measures of Cerebrovascular Reactivity and Intracranial Lesion Progression in Acute Traumatic Brain Injury Patients: A CENTER-TBI Study.
Mathieu F, Zeiler FA, Ercole A, Monteiro M, Kamnitsas K et al. (2020), Journal of neurotrauma, 37(13), 1556-1565
BibTeX
@article{relationshipbet-2020/7,
title={Relationship between Measures of Cerebrovascular Reactivity and Intracranial Lesion Progression in Acute Traumatic Brain Injury Patients: A CENTER-TBI Study.},
author={Mathieu F, Zeiler FA, Ercole A, Monteiro M, Kamnitsas K et al.},
journal={Journal of neurotrauma},
volume={37},
pages={1556-1565},
year = "2020"
}
Multiclass semantic segmentation and quantification of traumatic brain injury lesions on head CT using deep learning: an algorithm development and multicentre validation study.
Monteiro M, Newcombe VFJ, Mathieu F, Adatia K, Kamnitsas K et al. (2020), The Lancet. Digital health, 2(6), e314-e322
BibTeX
@article{multiclassseman-2020/6,
title={Multiclass semantic segmentation and quantification of traumatic brain injury lesions on head CT using deep learning: an algorithm development and multicentre validation study.},
author={Monteiro M, Newcombe VFJ, Mathieu F, Adatia K, Kamnitsas K et al.},
journal={The Lancet. Digital health},
volume={2},
pages={e314-e322},
year = "2020"
}
Explainable Anatomical Shape Analysis Through Deep Hierarchical Generative Models.
Biffi C, Cerrolaza JJ, Tarroni G, Bai W, de Marvao A et al. (2020), IEEE transactions on medical imaging, 39(6), 2088-2099
Image-level Harmonization of Multi-Site Data using Image-and-Spatial Transformer Networks
Robinson R, Dou Q, Castro DC, Kamnitsas K, de Groot M et al. (2020)
Stochastic Segmentation Networks: Modelling Spatially Correlated Aleatoric Uncertainty
Monteiro M, Folgoc LL, de Castro DC, Pawlowski N, Marques B et al. (2020)
A deep learning approach to segmentation of the developing cortex in fetal brain MRI with minimal manual labeling
Fetit AE, Alansary A, Cordero-Grande L, Cupitt J, Davidson AB et al. (2020), Proceedings of Machine Learning Research, 121, 241-261
BibTeX
@inproceedings{adeeplearningap-2020/1,
title={A deep learning approach to segmentation of the developing cortex in fetal brain MRI with minimal manual labeling},
author={Fetit AE, Alansary A, Cordero-Grande L, Cupitt J, Davidson AB et al.},
pages={241-261},
year = "2020"
}
Stochastic segmentation networks: Modelling spatially correlated aleatoric uncertainty
Monteiro M, Le Folgoc L, de Castro DC, Pawlowski N, Marques B et al. (2020), Advances in Neural Information Processing Systems, 2020-December
BibTeX
@inproceedings{stochasticsegme-2020/1,
title={Stochastic segmentation networks: Modelling spatially correlated aleatoric uncertainty},
author={Monteiro M, Le Folgoc L, de Castro DC, Pawlowski N, Marques B et al.},
year = "2020"
}
Preface dart 2020
Albarqouni S, Cardoso MJ, Kamnitsas K, Milletari F, Rieke N et al. (2020), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 12444 LNCS, v-vi
BibTeX
@article{prefacedart-2020/1,
title={Preface dart 2020},
author={Albarqouni S, Cardoso MJ, Kamnitsas K, Milletari F, Rieke N et al.},
journal={Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)},
volume={12444 LNCS},
pages={v-vi},
year = "2020"
}
Image-Level Harmonization of Multi-site Data Using Image-and-Spatial Transformer Networks
Robinson R, Dou Q, Coelho de Castro D, Kamnitsas K, de Groot M et al. (2020), 12267, 710-719