Showing 50 publications by Aidong Yang
Substituting fossil fuels in cement production with solar energy to reduce carbon emissions
Williams F & Yang A (2026), Renewable Energy, 260, 125227
Proteome constrained metabolic modeling of Sus scrofa muscle stem cells for cultured meat production
Qiu S, Kratochvilova E, Huang WE, Cui Z, Agnew T et al. (2026), Metabolic Engineering
Machine learning for enzyme catalytic activity: current progress and future horizons
Qiu S, Saeed H, Leonard W, Li F & Yang A (2026), Briefings in Bioinformatics, 27(1)
BibTeX
@article{machinelearning-2026/1,
title={Machine learning for enzyme catalytic activity: current progress and future horizons},
author={Qiu S, Saeed H, Leonard W, Li F & Yang A},
journal={Briefings in Bioinformatics},
volume={27},
number={bbag002},
publisher={Oxford University Press (OUP)},
year = "2026"
}
Electrochemical direct air capture with intermittent renewable energy: techno-economic insights from solar-driven electrodialysis systems
Liu G, Zhang Y, Lin M & Yang A (2026), Ees Solar
Unraveling risk dynamics in the urban food-energy-water system for sustainable management: A coupled model considering trivariate complexity
Li X, Zhang L, Yang A, Hao Y, Zhang P et al. (2025), Technological Forecasting and Social Change, 221, 124332-124332
BibTeX
@article{unravelingriskd-2025/12,
title={Unraveling risk dynamics in the urban food-energy-water system for sustainable management: A coupled model considering trivariate complexity},
author={Li X, Zhang L, Yang A, Hao Y, Zhang P et al.},
journal={Technological Forecasting and Social Change},
volume={221},
pages={124332-124332},
publisher={Elsevier},
year = "2025"
}
Process modelling and analysis of ikaite production for atmospheric CO2 removal through ocean alkalinity enhancement
Lu X, Millar R, Toutam P, Yang A, Foteinis S et al. (2025), Chemical Engineering Research and Design
BibTeX
@article{processmodellin-2025/12,
title={Process modelling and analysis of ikaite production for atmospheric CO2 removal through ocean alkalinity enhancement},
author={Lu X, Millar R, Toutam P, Yang A, Foteinis S et al.},
journal={Chemical Engineering Research and Design},
publisher={Elsevier},
year = "2025"
}
Proteome constrained metabolic modeling of <i>Sus scrofa</i> muscle stem cells for cultured meat production
Qiu S, Kratochvilova E, Huang WE, Cui Z, Agnew T et al. (2025)
Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production.
Qiu S, Yang A, Yang X, Ni H, Li W et al. (2025), Metabolic engineering, 91, 254-266
BibTeX
@article{proteometradeof-2025/5,
title={Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production.},
author={Qiu S, Yang A, Yang X, Ni H, Li W et al.},
journal={Metabolic engineering},
volume={91},
pages={254-266},
year = "2025"
}
Modeling and Feasibility Assessment of Mineral Carbonation Based on Biological pH Swing for Atmospheric CO 2 Removal
Zhang Y, Long S, Duret MT, Bullock LA, Lam P et al. (2025), ACS Sustainable Chemistry and Engineering, 13(19), 6972-6981
BibTeX
@article{modelingandfeas-2025/5,
title={Modeling and Feasibility Assessment of Mineral Carbonation Based on Biological pH Swing for Atmospheric CO 2 Removal},
author={Zhang Y, Long S, Duret MT, Bullock LA, Lam P et al.},
journal={ACS Sustainable Chemistry and Engineering},
volume={13},
pages={6972-6981},
publisher={American Chemical Society},
year = "2025"
}
Towards decarbonizing the supply chain of dairy industry: current practice and emerging strategies
Ni H, Zeng H, Liu Z, Li W, Miao S et al. (2025), Carbon Neutrality, 4(1)
BibTeX
@article{towardsdecarbon-2025/3,
title={Towards decarbonizing the supply chain of dairy industry: current practice and emerging strategies},
author={Ni H, Zeng H, Liu Z, Li W, Miao S et al.},
journal={Carbon Neutrality},
volume={4},
number={8},
publisher={Springer Nature Singapore},
year = "2025"
}
Seq2Topt: a sequence-based deep learning predictor of enzyme optimal temperature.
Qiu S, Hu B, Zhao J, Xu W & Yang A (2025), Briefings in bioinformatics, 26(2), bbaf114
BibTeX
@article{seqtoptasequenc-2025/3,
title={Seq2Topt: a sequence-based deep learning predictor of enzyme optimal temperature.},
author={Qiu S, Hu B, Zhao J, Xu W & Yang A},
journal={Briefings in bioinformatics},
volume={26},
pages={bbaf114},
publisher={Oxford University Press (OUP)},
year = "2025"
}
Quorum sensing regulating the productivity and stability of cross-feeding cocultivation
Chen D, Qu Z, Yang S, Li Y, Yu S et al. (2024), Chemical Engineering Journal, 502, 158167
Assembly of functional microbial ecosystems: from molecular circuits to communities.
Wu S, Zhou Y, Dai L, Yang A & Qiao J (2024), FEMS microbiology reviews, fuae026
Assessing the net carbon removal potential by a combination of direct air capture and recycled concrete aggregates carbonation
Chen L & Yang A (2024), Resources, Conservation and Recycling, 212
BibTeX
@article{assessingthenet-2024/10,
title={Assessing the net carbon removal potential by a combination of direct air capture and recycled concrete aggregates carbonation},
author={Chen L & Yang A},
journal={Resources, Conservation and Recycling},
volume={212},
number={107940},
publisher={Elsevier},
year = "2024"
}
Design and analysis of quorum sensing language “Interpreter” ecosystem for microbial community
Wu S, Zhang H, Zhou Y, Xu C, Yuan B et al. (2024), Chemical Engineering Journal, 496, 153148
BibTeX
@article{designandanalys-2024/9,
title={Design and analysis of quorum sensing language “Interpreter” ecosystem for microbial community},
author={Wu S, Zhang H, Zhou Y, Xu C, Yuan B et al.},
journal={Chemical Engineering Journal},
volume={496},
pages={153148},
publisher={Elsevier},
year = "2024"
}
Potential of reducing CO2 emissions in cement production through altering clinker compositions
Williams F & Yang A (2024), Industrial & Engineering Chemistry Research, 63(40), 17158-17167
BibTeX
@article{potentialofredu-2024/9,
title={Potential of reducing CO2 emissions in cement production through altering clinker compositions},
author={Williams F & Yang A},
journal={Industrial & Engineering Chemistry Research},
volume={63},
pages={17158-17167},
publisher={American Chemical Society},
year = "2024"
}
Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism
Qiu S, Huang Y, Liang S, Zeng H & Yang A (2024), Microbial Biotechnology, 17(2)
BibTeX
@article{systematiceluci-2024/2,
title={Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism},
author={Qiu S, Huang Y, Liang S, Zeng H & Yang A},
journal={Microbial Biotechnology},
volume={17},
number={e14425},
publisher={Wiley},
year = "2024"
}
Decarbonisation pathways of the cement production process via hydrogen and oxy-combustion
Williams F, Yang A & Nhuchhen DR (2024), Energy Conversion and Management, 300
DLTKcat: deep learning-based prediction of temperature-dependent enzyme turnover rates
Qiu S, Zhao S & Yang A (2024), Briefings in Bioinformatics, 25(1)
Food–energy–water nexus optimization brings substantial reduction of urban resource consumption and greenhouse gas emissions
Zhang P, Zhang L, Hao Y, Xu M, Pang M et al. (2024), PNAS Nexus, 3(2)
BibTeX
@article{foodenergywater-2024/1,
title={Food–energy–water nexus optimization brings substantial reduction of urban resource consumption and greenhouse gas emissions},
author={Zhang P, Zhang L, Hao Y, Xu M, Pang M et al.},
journal={PNAS Nexus},
volume={3},
number={pgae028},
publisher={Oxford University Press},
year = "2024"
}
Mathematical Modelling of a Novel Mineral Carbonation System Based on Biological pH Swing for Atmospheric CO2 Removal
Zhang Y & Yang A (2024), Computer Aided Chemical Engineering, 53(Archives of Microbiology 116 1978), 2509-2514
BibTeX
@article{mathematicalmod-2024/,
title={Mathematical Modelling of a Novel Mineral Carbonation System Based on Biological pH Swing for Atmospheric CO2 Removal},
author={Zhang Y & Yang A},
journal={Computer Aided Chemical Engineering},
volume={53},
pages={2509-2514},
publisher={Elsevier},
year = "2024"
}
Model-Based Assessment of Electrochemical Cells and Systems for Atmospheric CO2 Removal
Liu G & Yang A (2024), 53(Energy Environmental Science 4 4 2011), 541-546
Proteome trade-off between primary and secondary metabolism shapes acid stress induced bacterial exopolysaccharide production
Qiu S, Yang A, Yang X, Li W, Zeng H et al. (2024)
Re-organising nutrients flows in Leicestershire: systemic innovation to transform nutrient flows for environmental and socioeconomic benefits
Yang A, Ng KS, Thompson I, Tsui T, Wei Z et al. (2023)
Decarbonisation pathways of the cement production process via hydrogen and oxy-combustion
Williams F, Yang A & Nhuchhen DR (2023), Energy Conversion and Management, 300
Flux balance analysis-based metabolic modeling of microbial secondary metabolism: current status and outlook
Qiu S, Yang A & Zeng H (2023), PLoS Computational Biology, 19(8)
BibTeX
@article{fluxbalanceanal-2023/8,
title={Flux balance analysis-based metabolic modeling of microbial secondary metabolism: current status and outlook},
author={Qiu S, Yang A & Zeng H},
journal={PLoS Computational Biology},
volume={19},
number={e1011391},
publisher={Public Library of Science},
year = "2023"
}
Dynamic metagenome-scale metabolic modeling of a yogurt bacterial community.
Qiu S, Zeng H, Yang Z, Hung W-L, Wang B et al. (2023), Biotechnology and bioengineering, 120(8), 2186-2198
Flux balance analysis-based metabolic modeling of microbial secondary metabolism: Current status and outlook.
Qiu S, Yang A & Zeng H (2023), PLoS computational biology, 19(8), e1011391
Dynamic metagenome-scale metabolic modeling of a yogurt bacterial community
Qiu S, Zeng H, Yang Z, Hung W-L, Wang B et al. (2023), Biotechnology and Bioengineering, 120(8), 2186-2198
Global green hydrogen-based steel opportunities surrounding high quality renewable energy and iron ore deposits
Devlin A, Kossen J, Goldie-Jones H & Yang A (2023), Nature Communications, 14
BibTeX
@article{globalgreenhydr-2023/5,
title={Global green hydrogen-based steel opportunities surrounding high quality renewable energy and iron ore deposits},
author={Devlin A, Kossen J, Goldie-Jones H & Yang A},
journal={Nature Communications},
volume={14},
number={2578},
publisher={Springer Nature},
year = "2023"
}
Global green hydrogen-based steel opportunities surrounding high quality renewable energy and iron ore deposits.
Devlin A, Kossen J, Goldie-Jones H & Yang A (2023), Nature communications, 14(1), 2578
Surrogate modelling-assisted comparison of reactor schemes for carbon dioxide removal by enhanced weathering of minerals using seawater
Zhang J, Yang A, Darton R, Xing L & Vaughan A (2023), Chemical Engineering Journal, 461
BibTeX
@article{surrogatemodell-2023/2,
title={Surrogate modelling-assisted comparison of reactor schemes for carbon dioxide removal by enhanced weathering of minerals using seawater},
author={Zhang J, Yang A, Darton R, Xing L & Vaughan A},
journal={Chemical Engineering Journal},
volume={461},
number={141804},
publisher={Elsevier },
year = "2023"
}
Quorum sensing-based interactions among drugs, microbes, and diseases.
Wu S, Yang S, Wang M, Song N, Feng J et al. (2023), Science China. Life sciences, 66(1), 137-151
Development of a system model to predict flows and performance of regional waste management planning: A case study of England.
Ng KS & Yang A (2023), Journal of environmental management, 325(Pt B), 116585
Dynamic microbial-community metabolic modeling for yogurt fermentation based on the metagenome of starter culture
Qiu S, Yang Z, Zeng H, Wang B & Yang A (2023), 52, 2619-2624
Model-based Optimisation of Regional Nutrient Flow and Recovery for Resource and Environmental Sustainability
Bhasker Nair PNS, Yang NHN, Zhang W, Ng KS & Yang A (2023), 52, 1387-1392
Dynamic microbial-community metabolic modeling for yogurt fermentation based on the metagenome of starter culture
Qiu S, Yang Z, Zeng H, Wang B & Yang A (2023), 52(Biotechnology and Bioengineering 118 1 2021), 2619-2624
Model-based Optimisation of Regional Nutrient Flow and Recovery for Resource and Environmental Sustainability
Nair PNSB, Yang N-HN, Zhang W, Ng KS & Yang A (2023), 52(Science of The Total Environment 612 2018), 1387-1392
Dynamic community-level metabolic modeling for fermentation kinetics and metabolic interactions of the yogurt starter culture based on metagenomic analysis
Qiu S, Zeng H, Yang Z, Hung W-L, Wang B et al. (2023)
Systematic elucidation of independently modulated genes in<i>Lactobacillus plantarum</i>reveals a trade-off between secondary and primary metabolism
Qiu S, Huang Y, Liang S, Zeng H & Yang A (2023)
Potential of orthogonal and cross-talk quorum sensing for dynamic regulation in cocultivation
Wu S, Qiao J, Yang A & Liu C (2022), Chemical Engineering Journal, 445, 136720
Development of a system model to predict flows and performance of regional waste management planning: a case study of England
Ng KS & Yang A (2022), Journal of Environmental Management, 325
BibTeX
@article{developmentofas-2022/10,
title={Development of a system model to predict flows and performance of regional waste management planning: a case study of England},
author={Ng KS & Yang A},
journal={Journal of Environmental Management},
volume={325},
number={116585},
publisher={Elsevier},
year = "2022"
}
Urban bioeconomy: uncovering its components, impacts and the Urban Bio-Symbiosis
Yang N-HN & Yang A (2022), Cleaner Production Letters, 3
Machine learning aided construction of the quorum sensing communication network for human gut microbiota
Wu S, Feng J, Liu C, Wu H, Qiu Z et al. (2022), Nature Communications, 13(1)
BibTeX
@article{machinelearning-2022/6,
title={Machine learning aided construction of the quorum sensing communication network for human gut microbiota},
author={Wu S, Feng J, Liu C, Wu H, Qiu Z et al.},
journal={Nature Communications},
volume={13},
number={3079},
publisher={Springer Nature},
year = "2022"
}
Regional conditions shape the food–energy–land nexus of low-carbon indoor farming
Weidner T, Yang A, Forster F & Hamm MW (2022), Nature Food, 3, 206-216
Impact of fast-track regulatory designations on strategic commercialization decisions for autologous cell therapies
Lam C, Meinert E, Yang A & Cui Z (2022), Regenerative Medicine, 17(3), 155-174
BibTeX
@article{impactoffasttra-2022/1,
title={Impact of fast-track regulatory designations on strategic commercialization decisions for autologous cell therapies},
author={Lam C, Meinert E, Yang A & Cui Z},
journal={Regenerative Medicine},
volume={17},
pages={155-174},
publisher={Future Medicine Ltd},
year = "2022"
}
Regional supply chains for decarbonising steel: Energy efficiency and green premium mitigation
Devlin A & Yang A (2022), Energy Conversion and Management, 254
Embracing the era of renewable energy: model-based analysis of the role of operational flexibility in chemical production
Knight T, Chen C & Yang A (2022), 49, 1915-1920
Kinetics-informed global assessment of mine tailings for CO2 removal
Bullock L, Yang A & Darton R (2021), Science of the Total Environment, 808