Showing 162 publications by Cathy Ye
Predictive modelling of CHO cell culture using enzyme-constrained genome-scale metabolic models coupled with empirical regression
Wee H, Qiu S, Angione C, Ye H, Odeleye AOO et al. (2026), Biochemical Engineering Journal, 235, 110325
BibTeX
@article{predictivemodel-2026/11,
title={Predictive modelling of CHO cell culture using enzyme-constrained genome-scale metabolic models coupled with empirical regression},
author={Wee H, Qiu S, Angione C, Ye H, Odeleye AOO et al.},
journal={Biochemical Engineering Journal},
volume={235},
pages={110325},
publisher={Elsevier},
year = "2026"
}
Fibrin scaffolds for angiogenesis in soft tissue models: a systematic review
Fuenteslópez CV, Bahcevanci S, Patrulea V & Ye H (2026), Bioactive Materials, 56, 703-725
Proteome constrained metabolic modeling of Sus scrofa muscle stem cells for cultured meat production
Qiu S, Kratochvilova E, Huang WE, Cui Z, Agnew T et al. (2026), Metabolic Engineering
Small extracellular vesicles from human bone marrow mesenchymal stromal cells enhance migration and regulate reparative gene expression in dermal fibroblasts
Lei R, da Silva TB, Cui Z & Ye H (2025), Scientific Reports, 15(1)
BibTeX
@article{smallextracellu-2025/6,
title={Small extracellular vesicles from human bone marrow mesenchymal stromal cells enhance migration and regulate reparative gene expression in dermal fibroblasts},
author={Lei R, da Silva TB, Cui Z & Ye H},
journal={Scientific Reports},
volume={15},
number={19383},
publisher={Nature Research},
year = "2025"
}
Engineering a long-lasting microvasculature in vitro model for traumatic injury research
Fuenteslópez C, Papapavlou M, Thompson MS & Ye H (2025), Biomaterials Advances, 174
Purification of mesenchymal stromal cell‐derived small extracellular vesicles using ultrafiltration
Lei R, Ren S, Ye H & Cui Z (2025), Journal of Extracellular Biology, 4(1)
Predictive modeling of CHO cell culture using enzyme-constrained genome-scale metabolic models coupled with empirical regression
Wee H, Qiu S, Angione C, Ye H & Yang A (2025)
Mesenchymal stem cell cryopreservation with cavitation-mediated trehalose treatment
Fuenteslópez CV, Gray M, Bahcevanci S, Martin A, Smith CAB et al. (2024), Communications Engineering, 3(1)
BibTeX
@article{mesenchymalstem-2024/9,
title={Mesenchymal stem cell cryopreservation with cavitation-mediated trehalose treatment},
author={Fuenteslópez CV, Gray M, Bahcevanci S, Martin A, Smith CAB et al.},
journal={Communications Engineering},
volume={3},
number={129},
publisher={Nature Research},
year = "2024"
}
Reassessing long-term cryopreservation strategies for improved quality, safety, and clinical use of allogeneic dermal progenitor cells
Flahaut M, Laurent A, Fuenteslópez CV, Cui Z, Ye H et al. (2024), Journal of Investigative Dermatology, 144(10), P2125-2135
BibTeX
@article{reassessinglong-2024/8,
title={Reassessing long-term cryopreservation strategies for improved quality, safety, and clinical use of allogeneic dermal progenitor cells},
author={Flahaut M, Laurent A, Fuenteslópez CV, Cui Z, Ye H et al.},
journal={Journal of Investigative Dermatology},
volume={144},
pages={P2125-2135},
publisher={Elsevier},
year = "2024"
}
Highly Potent Cationic Chitosan Derivatives Coupled to Antimicrobial Peptide Dendrimers to Combat Pseudomonas aeruginosa (Adv. Healthcare Mater. 19/2024)
Jordan O, Gan BH, Alwan S, Perron K, Sublet E et al. (2024), Advanced Healthcare Materials, 13(19)
BibTeX
@article{highlypotentcat-2024/7,
title={Highly Potent Cationic Chitosan Derivatives Coupled to Antimicrobial Peptide Dendrimers to Combat Pseudomonas aeruginosa (Adv. Healthcare Mater. 19/2024)},
author={Jordan O, Gan BH, Alwan S, Perron K, Sublet E et al.},
journal={Advanced Healthcare Materials},
volume={13},
publisher={Wiley},
year = "2024"
}
Liver bioprinting within a novel support medium with functionalized spheroids, hepatic vein structures, and enhanced post-transplantation vascularization
Jiang Z, Jin B, Liang Z, Wang Y, Ren S et al. (2024), Biomaterials, 311
BibTeX
@article{liverbioprintin-2024/6,
title={Liver bioprinting within a novel support medium with functionalized spheroids, hepatic vein structures, and enhanced post-transplantation vascularization},
author={Jiang Z, Jin B, Liang Z, Wang Y, Ren S et al.},
journal={Biomaterials},
volume={311},
number={122681},
publisher={Elsevier},
year = "2024"
}
Tailoring silk fibroin fibrous architecture by a high‐yield electrospinning method for fast wound healing possibilities
Zhu J, Wang H, Wu C, Zhang K & Ye H (2024), Biotechnology and Bioengineering
Optimal metabolite transport in hollow fibre membrane bioreactors
Booth G, Dalwadi M, Ye H, Mouthuy P & Waters S (2024), Flow: Applications of Fluid Mechanics, 4
BibTeX
@article{optimalmetaboli-2024/6,
title={Optimal metabolite transport in hollow fibre membrane bioreactors},
author={Booth G, Dalwadi M, Ye H, Mouthuy P & Waters S},
journal={Flow: Applications of Fluid Mechanics},
volume={4},
number={E18},
publisher={Cambridge University Press},
year = "2024"
}
The Combination of Bioactive Herbal Compounds with Biomaterials for Regenerative Medicine.
Zhou G, Xu R, Groth T, Wang Y, Yuan X et al. (2024), Tissue engineering. Part B, Reviews
Highly Potent Cationic Chitosan Derivatives Coupled to Antimicrobial Peptide Dendrimers to Combat Pseudomonas aeruginosa.
Jordan O, Jordan O, Gan BH, Alwan S, Perron K et al. (2024), Advanced healthcare materials, e2304118-e2304118
BibTeX
@article{highlypotentcat-2024/2,
title={Highly Potent Cationic Chitosan Derivatives Coupled to Antimicrobial Peptide Dendrimers to Combat Pseudomonas aeruginosa.},
author={Jordan O, Jordan O, Gan BH, Alwan S, Perron K et al.},
journal={Advanced healthcare materials},
pages={e2304118-e2304118},
publisher={Wiley},
year = "2024"
}
Tailoring Silk Fibroin Fibrous Architecture by a High-yield Electrospinning Method for Fast Wound Healing Possibilities
Zhu J-C (2024)
AIM2 fosters lung adenocarcinoma immune escape by modulating PD-L1 expression in tumor-associated macrophages via JAK/STAT3.
Ye H, Yu W, Li Y, Bao X, Ni Y et al. (2023), Human vaccines & immunotherapeutics, 19(3), 2269790
BibTeX
@article{aimfosterslunga-2023/12,
title={AIM2 fosters lung adenocarcinoma immune escape by modulating PD-L1 expression in tumor-associated macrophages via JAK/STAT3.},
author={Ye H, Yu W, Li Y, Bao X, Ni Y et al.},
journal={Human vaccines & immunotherapeutics},
volume={19},
pages={2269790},
year = "2023"
}
Rational design of dibenzo[a,c]phenazine-derived isomeric thermally activated delayed fluorescence luminophores for efficient orange-red organic light-emitting diodes
Ye H, Yang J, Stavrou K, Li M, Liu F et al. (2023), Dyes and Pigments, 219, 111568
BibTeX
@article{rationaldesigno-2023/11,
title={Rational design of dibenzo[a,c]phenazine-derived isomeric thermally activated delayed fluorescence luminophores for efficient orange-red organic light-emitting diodes},
author={Ye H, Yang J, Stavrou K, Li M, Liu F et al.},
journal={Dyes and Pigments},
volume={219},
pages={111568},
publisher={Elsevier},
year = "2023"
}
Liquid‐Phase Integrated 3D Printed Biological Lenses for Lamellar Corneal Substitute
Xue Q, Hu H, Wang W, Li Q, Ma L et al. (2023), Advanced Healthcare Materials, 12(27), e2300600
Development and Optimisation of Hydrogel Scaffolds for Microvascular Network Formation.
Fuenteslópez CV, Thompson MS & Ye H (2023), Bioengineering (Basel, Switzerland), 10(8), 964
Development and optimisation of hydrogel scaffolds for microvascular network formation
Fuenteslópez CV, Thompson MS & Ye H (2023), Bioengineering, 10(8)
Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons
Adam C, Kayal C, Ercole A, Antoranz Contera S, Ye H et al. (2023), Communications Physics, 6(1)
BibTeX
@article{actionofthegene-2023/7,
title={Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons},
author={Adam C, Kayal C, Ercole A, Antoranz Contera S, Ye H et al.},
journal={Communications Physics},
volume={6},
number={174},
publisher={Springer Nature},
year = "2023"
}
A Shifted Urinary Microbiota Associated with Disease Activity and Immune Responses in Rheumatoid Arthritis.
Jin J, Li J, Hou M, Ding X, Zhong Y et al. (2023), Microbiology spectrum, 11(3), e0366222
Evaluation of fibrin/polyvinyl alcohol scaffolds for skin tissue engineering by emulsion templating
Dye JF, Zhou G, Zhu J, Inverarity C, Fang Y et al. (2023), Tissue Engineering Part A, 29(13-14), PP-026
BibTeX
@inproceedings{evaluationoffib-2023/6,
title={Evaluation of fibrin/polyvinyl alcohol scaffolds for skin tissue engineering by emulsion templating},
author={Dye JF, Zhou G, Zhu J, Inverarity C, Fang Y et al.},
booktitle={Tissue Engineering and Regenerative Medicine International Society (TERMIS) European Chapter Meeting 2023},
pages={PP-026},
year = "2023"
}
A hyaluronic acid granular hydrogel nerve guidance conduit promotes regeneration and functional recovery of injured sciatic nerves in rats.
Yang J, Hsu C-C, Cao T-T, Ye H, Chen J et al. (2023), Neural regeneration research, 18(3), 657-663
BibTeX
@article{ahyaluronicacid-2023/3,
title={A hyaluronic acid granular hydrogel nerve guidance conduit promotes regeneration and functional recovery of injured sciatic nerves in rats.},
author={Yang J, Hsu C-C, Cao T-T, Ye H, Chen J et al.},
journal={Neural regeneration research},
volume={18},
pages={657-663},
year = "2023"
}
Developments of microfluidics for orthopedic applications: A review
Sun M, Gong J, Cui W, Li C, Yu M et al. (2023), Smart Materials in Medicine, 4, 111-122
Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons
Adam C, Kayal C, Ercole A, Contera S, Ye H et al. (2023), COMMUNICATIONS PHYSICS, 6(1)
BibTeX
@article{actionofthegene-2023/,
title={Action of the general anaesthetic isoflurane reveals coupling between viscoelasticity and electrophysiological activity in individual neurons},
author={Adam C, Kayal C, Ercole A, Contera S, Ye H et al.},
journal={COMMUNICATIONS PHYSICS},
volume={6},
number={ARTN 174},
year = "2023"
}
Preventing antibiotic-resistant infections: additively manufactured porous Ti6Al4V biofunctionalized with Ag and Fe nanoparticles
Putra NE, Leeflang MA, Ducret V, Patrulea V, Fratila-Apachitei LE et al. (2022), International Journal of Molecular Sciences, 23(21)
BibTeX
@article{preventingantib-2022/10,
title={Preventing antibiotic-resistant infections: additively manufactured porous Ti6Al4V biofunctionalized with Ag and Fe nanoparticles},
author={Putra NE, Leeflang MA, Ducret V, Patrulea V, Fratila-Apachitei LE et al.},
journal={International Journal of Molecular Sciences},
volume={23},
number={13239},
publisher={MDPI },
year = "2022"
}
Optogenetically engineered neurons differentiated from human SH-SY5Y cells survived and expressed ChR2 in 3D hydrogel
Lee S-Y, George J, Nagel D, Ye H & Seymour L (2022), Biomedicines, 10(7)
BibTeX
@article{optogenetically-2022/6,
title={Optogenetically engineered neurons differentiated from human SH-SY5Y cells survived and expressed ChR2 in 3D hydrogel},
author={Lee S-Y, George J, Nagel D, Ye H & Seymour L},
journal={Biomedicines},
volume={10},
number={1534},
publisher={MDPI},
year = "2022"
}
A versatile embedding medium for freeform bioprinting with multi-crosslinking methods
Li Q, Jiang Z, Ma L, Yin J, Gao Z et al. (2022), Biofabrication, 14
Validation and scalability of homemade polycaprolactone macro-beads grafted with thermo-responsive poly (N-isopropyl acrylamide) for mesenchymal stem cell expansion and harvesting.
Nguyen LTB, Baudequin T, Cui Z & Ye H (2022), Biotechnology and bioengineering
BibTeX
@article{validationandsc-2022/5,
title={Validation and scalability of homemade polycaprolactone macro-beads grafted with thermo-responsive poly (N-isopropyl acrylamide) for mesenchymal stem cell expansion and harvesting.},
author={Nguyen LTB, Baudequin T, Cui Z & Ye H},
journal={Biotechnology and bioengineering},
year = "2022"
}
Electrospun fibres with hyaluronic acid-chitosan nanoparticles produced by a portable device
Fuenteslópez C & Ye H (2022), Tissue Engineering Part A, 28(S1)
BibTeX
@inproceedings{electrospunfibr-2022/4,
title={Electrospun fibres with hyaluronic acid-chitosan nanoparticles produced by a portable device},
author={Fuenteslópez C & Ye H},
booktitle={6th World Congress of the Tissue Engineering and Regenerative Medicine International Society (TERMIS 2021)},
year = "2022"
}
Combination of stem cell therapy and acupuncture to treat ischemic stroke: a prospective review
Jia H, He J, Zhao L, Hsu C-C, Zhao X et al. (2022), Stem Cell Research and Therapy, 13
BibTeX
@article{combinationofst-2022/3,
title={Combination of stem cell therapy and acupuncture to treat ischemic stroke: a prospective review},
author={Jia H, He J, Zhao L, Hsu C-C, Zhao X et al.},
journal={Stem Cell Research and Therapy},
volume={13},
number={87},
publisher={BioMed Central},
year = "2022"
}
Reprogramming Synthetic Cells for Targeted Cancer Therapy.
Lim B, Yin Y, Ye H, Cui Z, Papachristodoulou A et al. (2022), ACS synthetic biology
Voltage-driven alterations to neuron viscoelasticity
Kayal C, Tamayo-Elizalde M, Adam C, Ye H & Jerusalem A (2022), Bioelectricity, 4(1), 31-38
PHYSICAL AND BIOLOGICAL CHARACTERISATION OF MECHANICALLY AND STRUCTURALLY MIMETIC SMALL CALIBRE VASCULAR SCAFFOLDS
Martin R, Mouthuy P-A, Waters S & Ye H (2022), TISSUE ENGINEERING PART A, 28, S62-S62
BibTeX
@inproceedings{physicalandbiol-2022/,
title={PHYSICAL AND BIOLOGICAL CHARACTERISATION OF MECHANICALLY AND STRUCTURALLY MIMETIC SMALL CALIBRE VASCULAR SCAFFOLDS},
author={Martin R, Mouthuy P-A, Waters S & Ye H},
pages={S62-S62},
year = "2022"
}
DEVELOPMENT OF A TISSUE REGENERATIVE SCAFFOLD PLATFORM TECHNOLOGY
Bahcevanci S, Hathaway H, de la Rosa VR, Aksakal S, Dye J et al. (2022), TISSUE ENGINEERING PART A, 28, S429-S429
BibTeX
@inproceedings{developmentofat-2022/,
title={DEVELOPMENT OF A TISSUE REGENERATIVE SCAFFOLD PLATFORM TECHNOLOGY},
author={Bahcevanci S, Hathaway H, de la Rosa VR, Aksakal S, Dye J et al.},
pages={S429-S429},
year = "2022"
}
EXPLORING SEEDING METHODS TO EVENLY DISTRIBUTE CELLS IN A 3D ELECTROSPUN SCAFFOLD
Dvorak N, Savic L, Waters SL, Ye H, Carr A et al. (2022), TISSUE ENGINEERING PART A, 28, S366-S366
BibTeX
@misc{exploringseedin-2022/,
title={EXPLORING SEEDING METHODS TO EVENLY DISTRIBUTE CELLS IN A 3D ELECTROSPUN SCAFFOLD},
author={Dvorak N, Savic L, Waters SL, Ye H, Carr A et al.},
year = "2022"
}
Development of an in vitro microvasculature model for non-penetrating trauma research
Fuenteslopez CV, Ye H & Thompson M (2022), TISSUE ENGINEERING PART A, 28, 202-202
BibTeX
@inproceedings{developmentofan-2022/,
title={Development of an in vitro microvasculature model for non-penetrating trauma research},
author={Fuenteslopez CV, Ye H & Thompson M},
pages={202-202},
year = "2022"
}
Biomimetic 3D-bioprinted skin scaffolds for wound healing and regeneration
Patrulea V, Fuenteslopez CV & Ye HC (2022), TISSUE ENGINEERING PART A, 28, 561-561
BibTeX
@inproceedings{biomimeticdbiop-2022/,
title={Biomimetic 3D-bioprinted skin scaffolds for wound healing and regeneration},
author={Patrulea V, Fuenteslopez CV & Ye HC},
pages={561-561},
year = "2022"
}
Single cell electrophysiological alterations under dynamic loading at ultrasonic frequencies
Tamayo-Elizalde M, Kayal C, Ye H & Jerusalem A (2021), Brain Multiphysics, 2
In vitro study of human immune responses to hyaluronic acid hydrogels, recombinant spidroins and human neural progenitor cells of relevance to spinal cord injury repair
Lin C, Ekblad-Nordberg Å, Michaëlsson J, Götherström C, Hsu C-C et al. (2021), Cells, 10(7)
BibTeX
@article{invitrostudyofh-2021/7,
title={In vitro study of human immune responses to hyaluronic acid hydrogels, recombinant spidroins and human neural progenitor cells of relevance to spinal cord injury repair},
author={Lin C, Ekblad-Nordberg Å, Michaëlsson J, Götherström C, Hsu C-C et al.},
journal={Cells},
volume={10},
number={1713},
publisher={MDPI},
year = "2021"
}
Increased connectivity of hiPSC-derived neural networks in multiphase granular hydrogel scaffolds
Hsu C-C, George JH, Waller S, Besnard C, Nagel DA et al. (2021), Bioactive Materials, 9, 358-372
BibTeX
@article{increasedconnec-2021/7,
title={Increased connectivity of hiPSC-derived neural networks in multiphase granular hydrogel scaffolds},
author={Hsu C-C, George JH, Waller S, Besnard C, Nagel DA et al.},
journal={Bioactive Materials},
volume={9},
pages={358-372},
publisher={Elsevier},
year = "2021"
}
Objectives, benefits and challenges of bioreactor systems for the clinical-scale expansion of T lymphocyte cells
Baudequin T, Nyland R & Ye H (2021), Biotechnology Advances, 49
BibTeX
@article{objectivesbenef-2021/3,
title={Objectives, benefits and challenges of bioreactor systems for the clinical-scale expansion of T lymphocyte cells},
author={Baudequin T, Nyland R & Ye H},
journal={Biotechnology Advances},
volume={49},
number={107735},
publisher={Elsevier},
year = "2021"
}
Action potential alterations induced by single F11 neuronal cell loading
Tamayo-Elizalde M, Chen H, Malboubi M, Ye H & Jerusalem A (2021), Progress in Biophysics and Molecular Biology, 162, 141-153
BibTeX
@article{actionpotential-2021/1,
title={Action potential alterations induced by single F11 neuronal cell loading},
author={Tamayo-Elizalde M, Chen H, Malboubi M, Ye H & Jerusalem A},
journal={Progress in Biophysics and Molecular Biology},
volume={162},
pages={141-153},
publisher={Elsevier},
year = "2021"
}
Biomedical Applications of Electrospinning and Electrospraying: A volume in Woodhead Publishing Series in Biomaterials
Kasoju N & Ye H (2021), 1-465
Chapter Thirteen Electrospinning and electrospraying in biomedical engineering retrospect and prospects
Kasoju N, Ye H, Cui Z & Ramakrishna S (2021), 375-393