Showing 243 publications by Susanna-Assunta Sansone
Topic classification of synchrotron experiment proposals using the OpenAlex model: enhancing metadata granularity and assessing live service feasibility
Tan T, Clark OJ, Derry MJ, Duyme R, Faria GA et al. (2026), Journal of Synchrotron Radiation, 33(5)
BibTeX
@article{topicclassifica-2026/8,
title={Topic classification of synchrotron experiment proposals using the OpenAlex model: enhancing metadata granularity and assessing live service feasibility},
author={Tan T, Clark OJ, Derry MJ, Duyme R, Faria GA et al.},
journal={Journal of Synchrotron Radiation},
volume={33},
publisher={International Union of Crystallography},
year = "2026"
}
The FAIR Case for A Coherent Interoperability to support NHS 10 Year Health Plan
Tomlinson H, Beck T, Castillo FD, Clifton L, Cresswell K et al. (2026), Scientific Data
Towards a new vision of PaNET: enhancing reasoning capabilities for better photon and neutron data discovery
Tan T, Bago B, Busch S, Duyme R, Gaisne G et al. (2025), Journal of Synchrotron Radiation, 32(5), 1361-1369
BibTeX
@article{towardsanewvisi-2025/7,
title={Towards a new vision of PaNET: enhancing reasoning capabilities for better photon and neutron data discovery},
author={Tan T, Bago B, Busch S, Duyme R, Gaisne G et al.},
journal={Journal of Synchrotron Radiation},
volume={32},
pages={1361-1369},
publisher={International Union of Crystallography},
year = "2025"
}
Supporting FAIR Practices In Scholarly Publishing with the Editorial Reference Handbook
Lister A, Taylor-Grant R, Cannon M, Ahmed R, Alfarano G et al. (2025)
Developing fundamental research practice training at the University of Oxford
Callaghan S, Casci T, Dally K, Fortunato L, Palmero Fernandez M et al. (2024), Exchanges, 11(3), 66-79
BibTeX
@article{developingfunda-2024/8,
title={Developing fundamental research practice training at the University of Oxford},
author={Callaghan S, Casci T, Dally K, Fortunato L, Palmero Fernandez M et al.},
journal={Exchanges},
volume={11},
pages={66-79},
publisher={University of Warwick},
year = "2024"
}
“Be sustainable”: EOSC-Life recommendations for implementation of FAIR principles in life science data handling
David R, Rybina A, Burel J-M, Lister A & Sansone S (2023), The EMBO Journal, 42(23)
BibTeX
@article{besustainableeo-2023/11,
title={“Be sustainable”: EOSC-Life recommendations for implementation of FAIR principles in life science data handling},
author={David R, Rybina A, Burel J-M, Lister A & Sansone S},
journal={The EMBO Journal},
volume={42},
number={e115008},
publisher={EMBO Press},
year = "2023"
}
"Be sustainable": EOSC-Life recommendations for implementation of FAIR principles in life science data handling.
David R, Rybina A, Burel J-M, Heriche J-K, Audergon P et al. (2023), The EMBO journal, e115008
BibTeX
@article{besustainableeo-2023/11,
title={"Be sustainable": EOSC-Life recommendations for implementation of FAIR principles in life science data handling.},
author={David R, Rybina A, Burel J-M, Heriche J-K, Audergon P et al.},
journal={The EMBO journal},
pages={e115008},
publisher={EMBO},
year = "2023"
}
"Be sustainable": EOSC-Life recommendations for implementation of FAIR principles in life science data handling.
David R, Rybina A, Burel J-M, Heriche J-K, Audergon P et al. (2023), The EMBO journal, e115008
FAIR, ethical, and coordinated data sharing for COVID-19 response: a scoping review and cross-sectional survey of COVID-19 data sharing platforms and registries
Maxwell L, Shreedhar P, Dauga D, McQuilton P, Terry RF et al. (2023), Lancet Digital Health, 5(10), e712-e736
BibTeX
@article{fairethicalandc-2023/10,
title={FAIR, ethical, and coordinated data sharing for COVID-19 response: a scoping review and cross-sectional survey of COVID-19 data sharing platforms and registries},
author={Maxwell L, Shreedhar P, Dauga D, McQuilton P, Terry RF et al.},
journal={Lancet Digital Health},
volume={5},
pages={e712-e736},
publisher={Elsevier},
year = "2023"
}
FAIR, ethical, and coordinated data sharing for COVID-19 response: a scoping review and cross-sectional survey of COVID-19 data sharing platforms and registries.
Maxwell L, Shreedhar P, Dauga D, McQuilton P, Terry RF et al. (2023), The Lancet. Digital health, 5(10), e712-e736
BibTeX
@article{fairethicalandc-2023/10,
title={FAIR, ethical, and coordinated data sharing for COVID-19 response: a scoping review and cross-sectional survey of COVID-19 data sharing platforms and registries.},
author={Maxwell L, Shreedhar P, Dauga D, McQuilton P, Terry RF et al.},
journal={The Lancet. Digital health},
volume={5},
pages={e712-e736},
year = "2023"
}
Umbrella data management plans to integrate FAIR data: lessons from the ISIDORe and BY-COVID Consortia for Pandemic Preparedness
David R, Richard AS, Connellan C, Lister A, Romano P et al. (2023), Data Science Journal, 22
BibTeX
@article{umbrelladataman-2023/9,
title={Umbrella data management plans to integrate FAIR data: lessons from the ISIDORe and BY-COVID Consortia for Pandemic Preparedness},
author={David R, Richard AS, Connellan C, Lister A, Romano P et al.},
journal={Data Science Journal},
volume={22},
number={35},
publisher={Ubiquity Press},
year = "2023"
}
Community-driven governance of FAIRness assessment: an open issue, an open discussion.
Wilkinson MD, Sansone S-A, Méndez E, David R, Dennis R et al. (2023), Open research Europe, 2, 146
The Translational Data Catalog - discoverable biomedical datasets
Welter D, Rocca-Serra P, Grouès V, Sallam N, Ancien F et al. (2023), Scientific Data, 10
The Translational Data Catalog - discoverable biomedical datasets.
Welter D, Rocca-Serra P, Grouès V, Sallam N, Ancien F et al. (2023), Scientific data, 10(1), 470
FAIR data management: what does it mean for drug discovery?
Gadiya Y, Ioannidis V, Henderson D, Gribbon P, Rocca-Serra P et al. (2023), Frontiers in Drug Discovery, 3, 1226727-1226727
BibTeX
@article{fairdatamanagem-2023/7,
title={FAIR data management: what does it mean for drug discovery?},
author={Gadiya Y, Ioannidis V, Henderson D, Gribbon P, Rocca-Serra P et al.},
journal={Frontiers in Drug Discovery},
volume={3},
pages={1226727-1226727},
publisher={Frontiers},
year = "2023"
}
FAIR in action - a flexible framework to guide FAIRification
Welter D, Juty N, Rocca-Serra P, Xu F, Henderson D et al. (2023), Scientific Data, 10(1)
The FAIR Cookbook - the essential resource for and by FAIR doers
Rocca-Serra P, Gu W, Ioannidis V, Abbassi-Daloii T, Capella-Gutierrez S et al. (2023), Scientific Data, 10
BibTeX
@article{thefaircookbook-2023/5,
title={The FAIR Cookbook - the essential resource for and by FAIR doers},
author={Rocca-Serra P, Gu W, Ioannidis V, Abbassi-Daloii T, Capella-Gutierrez S et al.},
journal={Scientific Data},
volume={10},
number={292},
publisher={Springer Nature},
year = "2023"
}
The FAIR Cookbook - the essential resource for and by FAIR doers.
Rocca-Serra P, Gu W, Ioannidis V, Abbassi-Daloii T, Capella-Gutierrez S et al. (2023), Scientific data, 10(1), 292
FAIR in action - a flexible framework to guide FAIRification.
Welter D, Juty N, Rocca-Serra P, Xu F, Henderson D et al. (2023), Scientific data, 10(1), 291
Community-driven governance of FAIRness assessment: an open issue, an open discussion
Wilkinson M, Sansone S-A, Méndez E, David R, Dennis R et al. (2023)
Community-driven governance of FAIRness assessment: an open issue, an open discussion
Wilkinson MD, Sansone S-A, Méndez E, David R, Dennis R et al. (2022), Open Research Europe, 2
BibTeX
@article{communitydriven-2022/12,
title={Community-driven governance of FAIRness assessment: an open issue, an open discussion},
author={Wilkinson MD, Sansone S-A, Méndez E, David R, Dennis R et al.},
journal={Open Research Europe},
volume={2},
number={146},
publisher={European Commission},
year = "2022"
}
Making Common Fund data more findable: catalyzing a data ecosystem
Charbonneau AL, Brady A, Czajkowski K, Aluvathingal J, Canchi S et al. (2022), GigaScience, 11
BibTeX
@article{makingcommonfun-2022/11,
title={Making Common Fund data more findable: catalyzing a data ecosystem},
author={Charbonneau AL, Brady A, Czajkowski K, Aluvathingal J, Canchi S et al.},
journal={GigaScience},
volume={11},
number={giac105},
publisher={Oxford University Press},
year = "2022"
}
Machine actionable metadata models
Batista D, Gonzalez-Beltran A, Sansone S-A & Rocca-Serra P (2022), Scientific Data, 9
Perspectives on data sharing and the New NIH policy from the European Union
Bjaalie JG, Goble C, Sansone S-A, Nakamura R & Martone M (2022), Harvard Data Science Review, 4(3)
Reporting guidelines for human microbiome research: the STORMS checklist
Mirzayi C, Renson A, Zohra F, Elsafoury S, Geistlinger L et al. (2021), Nature Medicine, 27(11), 1885-1892
BibTeX
@article{reportingguidel-2021/11,
title={Reporting guidelines for human microbiome research: the STORMS checklist},
author={Mirzayi C, Renson A, Zohra F, Elsafoury S, Geistlinger L et al.},
journal={Nature Medicine},
volume={27},
pages={1885-1892},
publisher={Springer Nature},
year = "2021"
}
ELIXIR and toxicology: a community in development
Martens M, Stierum R, Schymanski E, Evelo C, Aalizadeh R et al. (2021), F1000Research, 10
Orchestrating and sharing large multimodal data for transparent and reproducible research
Mammoliti A, Smirnov P, Nakano M, Safikhani Z, Eeles C et al. (2021), Nature Communications, 12(1), 5797-5797
BibTeX
@article{orchestratingan-2021/10,
title={Orchestrating and sharing large multimodal data for transparent and reproducible research},
author={Mammoliti A, Smirnov P, Nakano M, Safikhani Z, Eeles C et al.},
journal={Nature Communications},
volume={12},
number={5797},
pages={5797-5797},
publisher={Nature Research},
year = "2021"
}
ISA API: an open platform for interoperable life science experimental metadata
Johnson D, Batista D, Cochrane K, Davey RP, Etuk A et al. (2021), GigaScience, 10(9)
BibTeX
@article{isaapianopenpla-2021/9,
title={ISA API: an open platform for interoperable life science experimental metadata},
author={Johnson D, Batista D, Cochrane K, Davey RP, Etuk A et al.},
journal={GigaScience},
volume={10},
number={giab060},
publisher={Oxford University Press},
year = "2021"
}
Barely sufficient practices in scientific computing
Lee G, Bacon S, Bush I, Fortunato L, Gavaghan D et al. (2021), Patterns, 2(2)
FAIRsharing: Data and Metadata Standards and Data Policies for Biomedical Research
McQuilton P & Sansone S-A (2021), 544-546
Making Common Fund data more findable: Catalyzing a Data Ecosystem
Charbonneau A, Brady A, Czajkowski K, Aluvathingal J, Canchi S et al. (2021)
Transparency and reproducibility in artificial intelligence
Haibe-Kains B, Adam GA, Hosny A, Khodakarami F, Waldron L et al. (2020), Nature, 586(7829), e14-e16
COPO: a metadata platform for brokering FAIR data in the life sciences
Shaw F, Etuk A, Minotto A, Gonzalez-Beltran A, Johnson D et al. (2020), F1000Research, 9, 495-495
COVID-19 pandemic reveals the peril of ignoring metadata standards
Schriml LM, Chuvochina M, Davies N, Eloe-Fadrosh EA, Finn RD et al. (2020), Scientific Data, 7(1)
Community standards for open cell migration data
Gonzalez-Beltran AN, Masuzzo P, Ampe C, Rocca-Serra P, Sansone S et al. (2020), GigaScience, 5(May 2020)
Enabling reusability of plant phenomic datasets with MIAPPE 1.1.
Papoutsoglou EA, Faria D, Arend D, Arnaud E, Athanasiadis IN et al. (2020), New Phytologist
Semantic concept schema of the linear mixed model of experimental observations
Ćwiek-Kupczyńska H, Filipiak K, Markiewicz A, Rocca-Serra P, Gonzalez-Beltran AN et al. (2020), Scientific Data, 7(1)
BibTeX
@article{semanticconcept-2020/2,
title={Semantic concept schema of the linear mixed model of experimental observations},
author={Ćwiek-Kupczyńska H, Filipiak K, Markiewicz A, Rocca-Serra P, Gonzalez-Beltran AN et al.},
journal={Scientific Data},
volume={7},
number={70},
publisher={Nature Research },
year = "2020"
}
TeSS: a platform for discovering life science training opportunities
Beard N, Bacall F, Nenadic A, Thurston M, Goble CA et al. (2020), Bioinformatics, 36(10), 3290-3291
Fostering global data sharing: highlighting the recommendations of the Research Data Alliance COVID-19 working group.
Austin CC, Bernier A, Bezuidenhout L, Bicarregui J, Biro T et al. (2020), Wellcome open research, 5, 267
BibTeX
@article{fosteringglobal-2020/1,
title={Fostering global data sharing: highlighting the recommendations of the Research Data Alliance COVID-19 working group.},
author={Austin CC, Bernier A, Bezuidenhout L, Bicarregui J, Biro T et al.},
journal={Wellcome open research},
volume={5},
pages={267},
year = "2020"
}
Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data
McQuilton P, Batista D, Beyan O, Granell R, Coles S et al. (2020), Data Intelligence, 2(1-2), 151-157
BibTeX
@article{helpingtheconsu-2020/1,
title={Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data},
author={McQuilton P, Batista D, Beyan O, Granell R, Coles S et al.},
journal={Data Intelligence},
volume={2},
pages={151-157},
publisher={China Science Publishing & Media},
year = "2020"
}
FAIR Principles: Interpretations and Implementation Considerations
Jacobsen A, de Miranda Azevedo R, Juty N, Batista D, Coles S et al. (2020), Data Intelligence, 2(1-2), 10-29
FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources
Sustkova HP, Hettne KM, Wittenburg P, Jacobsen A, Kuhn T et al. (2020), Data Intelligence, 2(1-2), 158-170
BibTeX
@article{fairconvergence-2020/1,
title={FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources},
author={Sustkova HP, Hettne KM, Wittenburg P, Jacobsen A, Kuhn T et al.},
journal={Data Intelligence},
volume={2},
pages={158-170},
publisher={MIT Press},
year = "2020"
}
Experiment design driven FAIRification of omics data matrices, an exemplar
Rocca-Serra P & Sansone S (2019), Scientific Data, 6, 271
FAIRshake: Toolkit to evaluate the FAIRness of research digital resources
Clarke DJB, Wang L, Jones A, Wojciechowicz ML, Torre D et al. (2019), Cell Systems, 9(5), 417-421
Evaluating FAIR-Compliance Through an Objective, Automated, Community-Governed Framework
Sansone S-A, McQuilton P, ROCCA-SERRA P & Batista D (2019), Scientific Data
Author Correction: Evaluating FAIR maturity through a scalable, automated, community-governed framework.
Dumontier M, Sansone S, Bonino Da Silva Santos LO, Batista D, Prieto M et al. (2019), Scientific Data, 6
BibTeX
@article{authorcorrectio-2019/9,
title={Author Correction: Evaluating FAIR maturity through a scalable, automated, community-governed framework.},
author={Dumontier M, Sansone S, Bonino Da Silva Santos LO, Batista D, Prieto M et al.},
journal={Scientific Data},
volume={6},
number={230},
publisher={Nature Research},
year = "2019"
}
Evaluating FAIR maturity through a scalable, automated, community-governed framework
Dumontier M, Sansone S, Bonino Da Silva Santos LO, Prieto M, Batista D et al. (2019), Scientific Data, 6
BibTeX
@article{evaluatingfairm-2019/9,
title={Evaluating FAIR maturity through a scalable, automated, community-governed framework},
author={Dumontier M, Sansone S, Bonino Da Silva Santos LO, Prieto M, Batista D et al.},
journal={Scientific Data},
volume={6},
number={174},
publisher={Springer Nature},
year = "2019"
}